RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 RARS2Q5T160 578 aaKnown RBP20.24■□□□□ 0.83
RIPPLY3-201ENST00000329553 NPAS3Q8IXF0 933 aa20.24■□□□□ 0.83
RIPPLY3-201ENST00000329553 FSTL5Q8N475 847 aaPredicted RBP20.24■□□□□ 0.83
RIPPLY3-201ENST00000329553 NAF1Q96HR8 494 aaKnown RBP20.24■□□□□ 0.83
RIPPLY3-201ENST00000329553 UNKQ9C0B0 810 aaKnown RBP20.24■□□□□ 0.83
RIPPLY3-201ENST00000329553 SLC28A3Q9HAS3 691 aa20.24■□□□□ 0.83
RIPPLY3-201ENST00000329553 A0A087X1B8 175 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 ITM2AO43736 263 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 PMLP29590 882 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 WEE1P30291 646 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 CDKN1CP49918 316 aaPredicted RBP20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 RPL26P61254 145 aaKnown RBP20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 DMC1Q14565 340 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 HSF5Q4G112 596 aaPredicted RBP20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 LYSMD3Q7Z3D4 306 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 TTC7BQ86TV6 843 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 ZSWIM9Q86XI8 627 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 OSCP1Q8WVF1 389 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 SCYL1Q96KG9 808 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 GPR63Q9BZJ6 419 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 THAP1Q9NVV9 213 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 IL17CQ9P0M4 197 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 NUP210Q8TEM1 1887 aaPredicted RBP20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 TK2O00142 265 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 FCHO1O14526 889 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 GYG2O15488 501 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 RALBP11234 206 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 SULT2A1Q06520 285 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 PEX6Q13608 980 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 ITGA9Q13797 1035 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 GEN1Q17RS7 908 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 KHDC1Q4VXA5 237 aaKnown RBP20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 CMPK2Q5EBM0 449 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 RINLQ6ZS11 566 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 ST13P5Q8NFI4 369 aaPredicted RBP20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 SLC2A11Q9BYW1 496 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 TAS2R1Q9NYW7 299 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 FBXO10Q9UK96 956 aa20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 FNDC3AQ9Y2H6 1198 aaKnown RBP20.23■□□□□ 0.83
RIPPLY3-201ENST00000329553 A0A0J9YYE9 177 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 TRBC1P01850 177 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 CYP17A1P05093 508 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 SERPINE1P05121 402 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 SP100P23497 879 aaPredicted RBP20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 FSHRP23945 695 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 SERPINA4P29622 427 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 MC4RP32245 332 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 HMGCLP35914 325 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 PTDSS1P48651 473 aaKnown RBP20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 EML3Q32P44 896 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 TCEAL5Q5H9L2 206 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 LRRC8EQ6NSJ5 796 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 ATG14Q6ZNE5 492 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 DPY19L3Q6ZPD9 716 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 PAF1Q8N7H5 531 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 OR6Y1Q8NGX8 325 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 HEXDCQ8WVB3 486 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 FGF13Q92913 245 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 ASIC4Q96FT7 647 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 TSPAN17Q96FV3 270 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 ASB16Q96NS5 453 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 CEP44Q9C0F1 390 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 NMUR2Q9GZQ4 415 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 MMADHCQ9H3L0 296 aaPredicted RBP20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 FAM96AQ9H5X1 160 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 TARM1B6A8C7 271 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 LIN7AO14910 233 aaPredicted RBP20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 LYPLA1O75608 230 aaPredicted RBP20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 APOA4P06727 396 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 SLC1A6P48664 564 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 CSHL1Q14406 222 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 RAB30Q15771 203 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 CARD16Q5EG05 197 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 FAM45BPQ6NSW5 357 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 PIANPQ8IYJ0 282 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 AHI1Q8N157 1196 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 PCDH20Q8N6Y1 951 aaKnown RBP20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 FAM45AQ8TCE6 357 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 SORCS1Q8WY21 1168 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 GPAMQ9HCL2 828 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 IGSF5Q9NSI5 407 aa20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 INTS10Q9NVR2 710 aaKnown RBP20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 MTF2Q9Y483 593 aaPredicted RBP20.22■□□□□ 0.83
RIPPLY3-201ENST00000329553 C5orf42Q9H799 3197 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 CAPN14A8MX76 684 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 H7C0S8 307 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 KIF1CO43896 1103 aaKnown RBP20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 ESRRAP11474 423 aaPredicted RBP20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 POLR2EP19388 210 aaKnown RBP20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 GRK2P25098 689 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 HNF1BP35680 557 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 CCNHP51946 323 aaPredicted RBP20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 TIAL1Q01085 375 aaKnown RBP eCLIP20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 PSAPL1Q6NUJ1 521 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 TMEM207Q6UWW9 146 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 Q6ZVU0 165 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 ALYREFQ86V81 257 aaKnown RBP20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 CDCA3Q99618 268 aaPredicted RBP20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 GDF15Q99988 308 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms