RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 OR7D4Q8NG98 312 aa14.02□□□□□ -0.16
ATP2C1-201ENST00000328560 DNAJB14Q8TBM8 379 aa14.02□□□□□ -0.16
ATP2C1-201ENST00000328560 SLC39A13Q96H72 371 aa14.02□□□□□ -0.16
ATP2C1-201ENST00000328560 OCEL1Q9H607 264 aa14.02□□□□□ -0.16
ATP2C1-201ENST00000328560 TMEM248Q9NWD8 314 aa14.02□□□□□ -0.16
ATP2C1-201ENST00000328560 NDUFA13Q9P0J0 144 aa14.02□□□□□ -0.16
ATP2C1-201ENST00000328560 PCDHB8Q9UN66 801 aa14.02□□□□□ -0.16
ATP2C1-201ENST00000328560 SCML2Q9UQR0 700 aa14.02□□□□□ -0.16
ATP2C1-201ENST00000328560 A0A0U1RQS6 177 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 MROH6A6NGR9 719 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 CLASP2O75122 1294 aaKnown RBP14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 BAIAP3O94812 1187 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 PRKAR2AP13861 404 aaKnown RBP14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 CDH15P55291 814 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 YBX1P67809 324 aaKnown RBP14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 FAM171A1Q5VUB5 890 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 LGI2Q8N0V4 545 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 MIER2Q8N344 545 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 TSPAN14Q8NG11 270 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 OR4L1Q8NH43 312 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 VPS33AQ96AX1 596 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 BTN2A3PQ96KV6 586 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 TRMOQ9BU70 441 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 PRDM5Q9NQX1 630 aaPredicted RBP14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 MT-ND1P03886 318 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 KCNQ1P51787 676 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 DIO3P55073 304 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 C11orf91Q3C1V1 193 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 C6orf10Q5SRN2 563 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 SAPCD2Q86UD0 394 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 EFHBQ8N7U6 833 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 RANBP9Q96S59 729 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 CCSER2Q9H7U1 834 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 ATP13A1Q9HD20 1204 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 RNF11Q9Y3C5 154 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 PCDHB5Q9Y5E4 795 aa14.02□□□□□ -0.17
ATP2C1-201ENST00000328560 RNF103-CHMP3A0A140T963 221 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 PLOD2O00469 737 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 AP1G1O43747 822 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 PAPSS2O95340 614 aaPredicted RBP14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 PIM1P11309 404 aaPredicted RBP14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 ZNF37AP17032 561 aaPredicted RBP14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 TYMPP19971 482 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 CAPN3P20807 821 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 GPX3P22352 226 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 CTGFP29279 349 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 SLC7A1P30825 629 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 INHBCP55103 352 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 PRKCZQ05513 592 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 TSNQ15631 228 aaKnown RBP14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 VARS2Q5ST30 1063 aaKnown RBP14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 FBXO39Q8N4B4 442 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 ZFRQ96KR1 1074 aaKnown RBP14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 NDUFAF1Q9Y375 327 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 hCG_2014768A0A024R1R8 64 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 NME4O00746 187 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 ENPP3O14638 875 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 SCAMP3O14828 347 aaKnown RBP14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 NDUFS3O75489 264 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 C8BP07358 591 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 SERPINF2P08697 491 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 ELNP15502 786 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 APLP1P51693 650 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 PLIN5Q00G26 463 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 HMBOX1Q6NT76 420 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 B3GNT6Q6ZMB0 384 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 TMEM126BQ8IUX1 230 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 OR4K2Q8NGD2 314 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 NCSTNQ92542 709 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 C1orf50Q9BV19 199 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 TMEM181Q9P2C4 612 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 COMMD10Q9Y6G5 202 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 MYLKQ15746 1914 aa14.01□□□□□ -0.17
ATP2C1-201ENST00000328560 CDC7O00311 574 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 RPP40O75818 363 aaKnown RBP14□□□□□ -0.17
ATP2C1-201ENST00000328560 CDKN1CP49918 316 aaPredicted RBP14□□□□□ -0.17
ATP2C1-201ENST00000328560 PTPRRQ15256 657 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 FAM47BQ8NA70 645 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 OR2T34Q8NGX1 318 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 OR2T3Q8NH03 318 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 TMIGD2Q96BF3 282 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 PHF12Q96QT6 1004 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 HBEGFQ99075 208 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 LIN28AQ9H9Z2 209 aaKnown RBP14□□□□□ -0.17
ATP2C1-201ENST00000328560 BPIFA1Q9NP55 256 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 POLR3BQ9NW08 1133 aaPredicted RBP14□□□□□ -0.17
ATP2C1-201ENST00000328560 MAP10Q9P2G4 905 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 CD300AQ9UGN4 299 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 WASH4PA8MWX3 477 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 BTN3A1O00481 513 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 CA12O43570 354 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 MTHFD1P11586 935 aaKnown RBP14□□□□□ -0.17
ATP2C1-201ENST00000328560 FDXRP22570 491 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 PBX3P40426 434 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 AGTR2P50052 363 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 SERINC3Q13530 473 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 LAMB3Q13751 1172 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 DSC3Q14574 896 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 UGT3A2Q3SY77 523 aa14□□□□□ -0.17
ATP2C1-201ENST00000328560 CBR4Q8N4T8 237 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms