RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 LSM3P62310 102 aaKnown RBP10.9□□□□□ -0.67
SNRNP200-201ENST00000323853 TUSC3Q13454 348 aa10.9□□□□□ -0.67
SNRNP200-201ENST00000323853 LSM12Q3MHD2 195 aaKnown RBP10.9□□□□□ -0.67
SNRNP200-201ENST00000323853 PGAM4Q8N0Y7 254 aa10.9□□□□□ -0.67
SNRNP200-201ENST00000323853 PYROXD2Q8N2H3 581 aa10.9□□□□□ -0.67
SNRNP200-201ENST00000323853 FNDC11Q9BVV2 318 aa10.9□□□□□ -0.67
SNRNP200-201ENST00000323853 CCNB1IP1Q9NPC3 277 aa10.9□□□□□ -0.67
SNRNP200-201ENST00000323853 TBC1D3BA6NDS4 549 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 KCNU1A8MYU2 1149 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 ENO2P09104 434 aaPredicted RBP10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 NR2F1P10589 423 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 CYP4B1P13584 511 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 CYP4F2P78329 520 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 CYP4F3Q08477 520 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 SMARCB1Q12824 385 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 VWA5B1Q5TIE3 1220 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 CLDN11O75508 207 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 VNN1O95497 513 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 GDF10P55107 478 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 CDH13P55290 713 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 CPSF6Q16630 551 aaKnown RBP eCLIP10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 PYDC2Q56P42 97 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 GPR158Q5T848 1215 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 C16orf62Q7Z3J2 963 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 TFAP2BQ92481 460 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 GORASP1Q9BQQ3 440 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 SGK2Q9HBY8 427 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 EIF2B3Q9NR50 452 aaKnown RBP10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 GLYATL1P3A0A0U1RQE8 302 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 PSMD11O00231 422 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 RHOQP17081 205 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 NELFEP18615 380 aaKnown RBP10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 RALGDSQ12967 914 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 FAM220AQ7Z4H9 259 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 ZNF671Q8TAW3 534 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 ZHX1-C8orf76Q96EF9 292 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 CLEC4MQ9H2X3 399 aaPredicted RBP10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 XRN1Q8IZH2 1706 aaKnown RBP10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 C2CD4BA6NLJ0 364 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 GRM6O15303 877 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 UNGP13051 313 aaPredicted RBP10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 SMAD3P84022 425 aaKnown RBP10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 TRIM40Q6P9F5 258 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 STYXQ8WUJ0 223 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 HEXDCQ8WVB3 486 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 PPCDCQ96CD2 204 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 TRIM17Q9Y577 477 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 PCDHA2Q9Y5H9 948 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 MFN2O95140 757 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 CCNYL3P0C7X3 344 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 DBTP11182 482 aaKnown RBP10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 SP100P23497 879 aaPredicted RBP10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 NMBRP28336 390 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 ROR2Q01974 943 aaKnown RBP10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 NPY5RQ15761 445 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 AP5B1Q2VPB7 878 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 C6orf52Q5T4I8 152 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 DEF8Q6ZN54 512 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 KIAA0408Q6ZU52 694 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 SAPCD2Q86UD0 394 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 AMER2Q8N7J2 671 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 BANPQ8N9N5 519 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 OR2T12Q8NG77 320 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 ARHGEF4Q9NR80 690 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 ERGIC3Q9Y282 383 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 CCDC182A6NF36 153 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 RGS1Q08116 209 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 TARBP2Q15633 366 aaKnown RBP10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 COL26A1Q96A83 441 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 PSME2Q9UL46 239 aa10.89□□□□□ -0.67
SNRNP200-201ENST00000323853 ETS2P15036 469 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 MSX2P35548 267 aaPredicted RBP10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 CNTD1Q8N815 330 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 TEX47Q8TBZ9 253 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 ZNF607Q96SK3 696 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 COPS8Q99627 209 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 HNRNPABQ99729 332 aaKnown RBP10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 TRIM8Q9BZR9 551 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 KCTD5Q9NXV2 234 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 H0YC42 278 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 GPR25O00155 361 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 MATN3O15232 486 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 ZW10O43264 779 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 OR10H3O60404 316 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 SLC25A14O95258 325 aaPredicted RBP10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 OR4Q2P0C623 313 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 TACR2P21452 398 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 CCR4P51679 360 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 TIGD2Q4W5G0 525 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 POMGNT2Q8NAT1 580 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 DPF3Q92784 378 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 TTPALQ9BTX7 342 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 ZFYVE1Q9HBF4 777 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 FETUBQ9UGM5 382 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 COL14A1Q05707 1796 aaKnown RBP10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 FGF19O95750 216 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 ATP12AP54707 1039 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 TMEM63BQ5T3F8 832 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 GALNT18Q6P9A2 607 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms