RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 MSCO60682 206 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 MBL2P11226 248 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-201ENST00000322507 ACO1P21399 889 aaKnown RBP9.72□□□□□ -0.85
COL12A1-201ENST00000322507 RPL14P50914 215 aaKnown RBP9.72□□□□□ -0.85
COL12A1-201ENST00000322507 TNK2Q07912 1038 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 LLGL2Q6P1M3 1020 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 RPTNQ6XPR3 784 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 PPP1R14DQ9NXH3 145 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 MARK1Q9P0L2 795 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 DGKIO75912 1065 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 IDO1P14902 403 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 UTP15Q8TED0 518 aaKnown RBP9.72□□□□□ -0.85
COL12A1-201ENST00000322507 TM9SF3Q9HD45 589 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 DNAJC5BQ9UF47 199 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 PCDHGA6Q9Y5G7 932 aa9.72□□□□□ -0.85
COL12A1-201ENST00000322507 NPIPA5A0A0B4J1W7 369 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 BBIP1A8MTZ0 92 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 IFNA6P05013 189 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 HTR7P34969 479 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 PTF1AQ7RTS3 328 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 FAM228AQ86W67 206 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 B3GALNT2Q8NCR0 500 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 PIWIL2Q8TC59 973 aaKnown RBP9.71□□□□□ -0.85
COL12A1-201ENST00000322507 TBL1YQ9BQ87 522 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 RASSF1Q9NS23 344 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 PIGBOS1A0A0B4J2F0 54 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 MTHFD1P11586 935 aaKnown RBP9.71□□□□□ -0.85
COL12A1-201ENST00000322507 HALP42357 657 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 REXO1L1PQ8IX06 675 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 TRIT1Q9H3H1 467 aaKnown RBP9.71□□□□□ -0.85
COL12A1-201ENST00000322507 OPTCQ9UBM4 332 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 PIGRP01833 764 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 KCNJ1P48048 391 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 MYBPC3Q14896 1274 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 ZNHIT3Q15649 155 aaPredicted RBP9.71□□□□□ -0.85
COL12A1-201ENST00000322507 BATFQ16520 125 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 HLA-DQA1Q5Y7H0 255 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 ZNF767PQ75MW2 155 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 DNAJB7Q7Z6W7 309 aaPredicted RBP9.71□□□□□ -0.85
COL12A1-201ENST00000322507 CAND1Q86VP6 1230 aaKnown RBP9.71□□□□□ -0.85
COL12A1-201ENST00000322507 ERLEC1Q96DZ1 483 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 TMEM45AQ9NWC5 275 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 UBOX5O94941 541 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 RLN2P04090 185 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 CAP2P40123 477 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 SCNN1BP51168 640 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 SEC24CP53992 1094 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 CACNB2Q08289 660 aaPredicted RBP9.71□□□□□ -0.85
COL12A1-201ENST00000322507 MCOLN2Q8IZK6 566 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 FBXO25Q8TCJ0 367 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 ACSL5Q9ULC5 683 aa9.71□□□□□ -0.85
COL12A1-201ENST00000322507 SERPINA4P29622 427 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 PPA2Q9H2U2 334 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 RIOX1Q9H6W3 641 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 POPDC2Q9HBU9 364 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 PRKAG3Q9UGI9 489 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 CCNDBP1O95273 360 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 ZBTB11O95625 1053 aaPredicted RBP9.71□□□□□ -0.86
COL12A1-201ENST00000322507 ERCC2P18074 760 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 VAMP2P63027 116 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 ECT2LQ008S8 904 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 MAP4K2Q12851 820 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 ZNF639Q9UID6 485 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 TAF6LQ9Y6J9 622 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 SGCEO43556 437 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 TGDSO95455 350 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 STAU1O95793 577 aaKnown RBP9.71□□□□□ -0.86
COL12A1-201ENST00000322507 CYP3A4P08684 503 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 QSOX2Q6ZRP7 698 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 COLGALT1Q8NBJ5 622 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 FCGR1BQ92637 280 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 DPF2Q92785 391 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 KCNS3Q9BQ31 491 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 AGO4Q9HCK5 861 aaKnown RBP9.71□□□□□ -0.86
COL12A1-201ENST00000322507 H3BRB1 525 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 ATP5F1P24539 256 aaPredicted RBP9.71□□□□□ -0.86
COL12A1-201ENST00000322507 CLK3P49761 638 aaKnown RBP9.71□□□□□ -0.86
COL12A1-201ENST00000322507 SGCGQ13326 291 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 MPP7Q5T2T1 576 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 ZNF549Q6P9A3 640 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 ANKRD23Q86SG2 305 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 RUSC1Q9BVN2 902 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 ELP3Q9H9T3 547 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 PRPF19Q9UMS4 504 aaKnown RBP9.71□□□□□ -0.86
COL12A1-201ENST00000322507 ZNF510Q9Y2H8 683 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 THPOP40225 353 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 CREB3L2Q70SY1 520 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 ZSCAN1Q8NBB4 408 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 RPLP0P6Q8NHW5 317 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 C16orf58Q96GQ5 468 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 OR5B12Q96R08 314 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 PXMP2Q9NR77 195 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 GGT7Q9UJ14 662 aa9.71□□□□□ -0.86
COL12A1-201ENST00000322507 TSR3Q9UJK0 312 aaKnown RBP9.71□□□□□ -0.86
COL12A1-201ENST00000322507 USP46P62068 366 aa9.7□□□□□ -0.86
COL12A1-201ENST00000322507 ADAMTSL2Q86TH1 951 aa9.7□□□□□ -0.86
COL12A1-201ENST00000322507 OR5T2Q8NGG2 359 aa9.7□□□□□ -0.86
COL12A1-201ENST00000322507 RAD9AQ99638 391 aa9.7□□□□□ -0.86
COL12A1-201ENST00000322507 BHLHE41Q9C0J9 482 aaPredicted RBP9.7□□□□□ -0.86
COL12A1-201ENST00000322507 GNG13Q9P2W3 67 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms