RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 C2orf81A6NN90 581 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 NBNO60934 754 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 GALTP07902 379 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 GFAPP14136 432 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 TSPAN8P19075 237 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 CR2P20023 1033 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 GATMP50440 423 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 CCNHP51946 323 aaPredicted RBP22.3■■□□□ 1.16
PNKP-201ENST00000322344 CDH13P55290 713 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 RAD51Q06609 339 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 BFSP2Q13515 415 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 PFKFB4Q16877 469 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 FOXB2Q5VYV0 432 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 KANK2Q63ZY3 851 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 C8orf82Q6P1X6 216 aaPredicted RBP22.3■■□□□ 1.16
PNKP-201ENST00000322344 PAOXQ6QHF9 649 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 CHST9Q7L1S5 443 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 GLT6D1Q7Z4J2 308 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 NPAS4Q8IUM7 802 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 PCYOX1LQ8NBM8 494 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 RMDN1Q96DB5 314 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 AKTIPQ9H8T0 292 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 MID1IP1Q9NPA3 183 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 SCUBE2Q9NQ36 999 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 CNOT11Q9UKZ1 510 aaKnown RBP22.3■■□□□ 1.16
PNKP-201ENST00000322344 SPO11Q9Y5K1 396 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 DNAJC15Q9Y5T4 150 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 UBA6A0AVT1 1052 aaPredicted RBP22.29■■□□□ 1.16
PNKP-201ENST00000322344 H3BMM5 538 aa22.29■■□□□ 1.16
PNKP-201ENST00000322344 PFDN6O15212 129 aa22.29■■□□□ 1.16
PNKP-201ENST00000322344 NDUFS3O75489 264 aa22.29■■□□□ 1.16
PNKP-201ENST00000322344 RHOCP08134 193 aa22.29■■□□□ 1.16
PNKP-201ENST00000322344 ARSAP15289 507 aa22.29■■□□□ 1.16
PNKP-201ENST00000322344 PEX19P40855 299 aa22.29■■□□□ 1.16
PNKP-201ENST00000322344 TUFMP49411 452 aaKnown RBP22.29■■□□□ 1.16
PNKP-201ENST00000322344 UGT2A3Q6UWM9 527 aa22.29■■□□□ 1.16
PNKP-201ENST00000322344 LILRA2Q8N149 483 aa22.29■■□□□ 1.16
PNKP-201ENST00000322344 SEPT8Q92599 483 aa22.29■■□□□ 1.16
PNKP-201ENST00000322344 PKP2Q99959 881 aa22.29■■□□□ 1.16
PNKP-201ENST00000322344 TDRD1Q9BXT4 1180 aaKnown RBP22.29■■□□□ 1.16
PNKP-201ENST00000322344 TMEM181Q9P2C4 612 aa22.29■■□□□ 1.16
PNKP-201ENST00000322344 SYCE1LA8MT33 242 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 VPS4BO75351 444 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 PYGLP06737 847 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 TCN1P20061 433 aaPredicted RBP22.28■■□□□ 1.16
PNKP-201ENST00000322344 GPX3P22352 226 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 SCNN1BP51168 640 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 HECTD3Q5T447 861 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 NKAPQ8N5F7 415 aaKnown RBP22.28■■□□□ 1.16
PNKP-201ENST00000322344 OR4K2Q8NGD2 314 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 TWIST2Q8WVJ9 160 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 DUS3LQ96G46 650 aaKnown RBP22.28■■□□□ 1.16
PNKP-201ENST00000322344 C3orf30Q96M34 536 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 CD300AQ9UGN4 299 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 RNF112Q9ULX5 631 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.28■■□□□ 1.16
PNKP-201ENST00000322344 MAP3K13O43283 966 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 SIX3O95343 332 aaPredicted RBP22.28■■□□□ 1.16
PNKP-201ENST00000322344 FMO4P31512 558 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 RHDQ02161 417 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 ZNF177Q13360 481 aaPredicted RBP22.28■■□□□ 1.16
PNKP-201ENST00000322344 GEN1Q17RS7 908 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 FBXL19Q6PCT2 694 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 FBXO39Q8N4B4 442 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 FAM156AQ8NDB6 213 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 FBXO22Q8NEZ5 403 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 ZNF512Q96ME7 567 aaPredicted RBP22.28■■□□□ 1.16
PNKP-201ENST00000322344 AGO1Q9UL18 857 aaKnown RBP22.28■■□□□ 1.16
PNKP-201ENST00000322344 TBC1D30Q9Y2I9 924 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 NDUFAF1Q9Y375 327 aa22.28■■□□□ 1.16
PNKP-201ENST00000322344 CHD5Q8TDI0 1954 aa22.27■■□□□ 1.16
PNKP-201ENST00000322344 ATP6AP2A0A1C7CYW4 349 aa22.27■■□□□ 1.16
PNKP-201ENST00000322344 CLASP2O75122 1294 aaKnown RBP22.27■■□□□ 1.16
PNKP-201ENST00000322344 ATP6AP2O75787 350 aa22.27■■□□□ 1.16
PNKP-201ENST00000322344 ALDOCP09972 364 aaKnown RBP22.27■■□□□ 1.16
PNKP-201ENST00000322344 CD9P21926 228 aa22.27■■□□□ 1.16
PNKP-201ENST00000322344 RGRP47804 291 aa22.27■■□□□ 1.16
PNKP-201ENST00000322344 RPS24P62847 133 aaKnown RBP22.27■■□□□ 1.16
PNKP-201ENST00000322344 LCP2Q13094 533 aa22.27■■□□□ 1.16
PNKP-201ENST00000322344 KIF19Q2TAC6 998 aa22.27■■□□□ 1.16
PNKP-201ENST00000322344 SLC8B1Q6J4K2 584 aa22.27■■□□□ 1.16
PNKP-201ENST00000322344 PRMT9Q6P2P2 845 aa22.27■■□□□ 1.16
PNKP-201ENST00000322344 PAQR3Q6TCH7 311 aa22.27■■□□□ 1.16
PNKP-201ENST00000322344 PRSS55Q6UWB4 352 aaPredicted RBP22.27■■□□□ 1.16
PNKP-201ENST00000322344 TMEM102Q8N9M5 508 aaPredicted RBP22.27■■□□□ 1.16
PNKP-201ENST00000322344 PRICKLE1Q96MT3 831 aaPredicted RBP22.27■■□□□ 1.16
PNKP-201ENST00000322344 CYP2S1Q96SQ9 504 aa22.27■■□□□ 1.16
PNKP-201ENST00000322344 CWH43Q9H720 699 aa22.27■■□□□ 1.16
PNKP-201ENST00000322344 TMCO1Q9UM00 188 aa22.27■■□□□ 1.16
PNKP-201ENST00000322344 ACTL7AQ9Y615 435 aa22.27■■□□□ 1.16
PNKP-201ENST00000322344 OAS3Q9Y6K5 1087 aaKnown RBP22.27■■□□□ 1.16
PNKP-201ENST00000322344 ANKRD36A6QL64 1941 aa22.27■■□□□ 1.15
PNKP-201ENST00000322344 ZNF840PA6NDX5 716 aa22.26■■□□□ 1.15
PNKP-201ENST00000322344 SUPT3HB4E1H0 165 aa22.26■■□□□ 1.15
PNKP-201ENST00000322344 NT5C1B-RDH14C9J2C7 533 aa22.26■■□□□ 1.15
PNKP-201ENST00000322344 DNAJA2O60884 412 aa22.26■■□□□ 1.15
PNKP-201ENST00000322344 SUPT3HO75486 399 aa22.26■■□□□ 1.15
PNKP-201ENST00000322344 STAMBPO95630 424 aa22.26■■□□□ 1.15
PNKP-201ENST00000322344 LPOP22079 712 aaPredicted RBP22.26■■□□□ 1.15
PNKP-201ENST00000322344 TLR1Q15399 786 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms