RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 PSIP1O75475 530 aaKnown RBP7.05□□□□□ -1.28
SMC1A-201ENST00000322213 LTFP02788 710 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 CDKN2BP42772 138 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 STT3AP46977 705 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 VBP1P61758 197 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 HYIQ5T013 277 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 IL23RQ5VWK5 629 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 HMBOX1Q6NT76 420 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 BORAQ6PGQ7 559 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 CPSF7Q8N684 471 aaKnown RBP7.05□□□□□ -1.28
SMC1A-201ENST00000322213 LSM14AQ8ND56 463 aaKnown RBP7.05□□□□□ -1.28
SMC1A-201ENST00000322213 APOL2Q9BQE5 337 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 SLITRK2Q9H156 845 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 RHOJQ9H4E5 214 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 WDR6Q9NNW5 1121 aaKnown RBP7.05□□□□□ -1.28
SMC1A-201ENST00000322213 DOCK10Q96BY6 2186 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 CYP3A7-CYP3A51PA0A087WV96 503 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 OR14I1A6ND48 311 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 TOR1BO14657 336 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 ZW10O43264 779 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 ECDO95905 644 aaPredicted RBP7.05□□□□□ -1.28
SMC1A-201ENST00000322213 CYP3A7P24462 503 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 MAGEA2P43356 314 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 ETV1P50549 477 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 GABARAPL2P60520 117 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 HSD17B12Q53GQ0 312 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 RNF219Q5W0B1 726 aaPredicted RBP7.05□□□□□ -1.28
SMC1A-201ENST00000322213 OVOS1Q6IE37 1185 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 SHC3Q92529 594 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 TCEAL3Q969E4 200 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 ZNF347Q96SE7 839 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 DCSTAMPQ9H295 470 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 MIEF1Q9NQG6 463 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 TRAF6Q9Y4K3 522 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 F9P00740 461 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 C9P02748 559 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 UNC5AQ6ZN44 842 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 ANKRD52Q8NB46 1076 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 GLIS3Q8NEA6 775 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 ACTR8Q9H981 624 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 GGA3Q9NZ52 723 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 SNX9Q9Y5X1 595 aa7.05□□□□□ -1.28
SMC1A-201ENST00000322213 DDX60LQ5H9U9 1706 aaKnown RBP7.05□□□□□ -1.28
SMC1A-201ENST00000322213 OR6C70A6NIJ9 312 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 M0QYT0 321 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 OGTO15294 1046 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 MT-CO1P00395 513 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 PTX3P26022 381 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-201ENST00000322213 CRADDP78560 199 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 EFR3AQ14156 821 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 GNA13Q14344 377 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 FXNQ16595 210 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-201ENST00000322213 GALNT5Q7Z7M9 940 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 SLC4A9Q96Q91 983 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 IL17RBQ9NRM6 502 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 NFKBIL1Q9UBC1 381 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-201ENST00000322213 J3QRK9 145 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 SULT1B1O43704 296 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 CHRNB1P11230 501 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 MAGP20916 626 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 MVKQ03426 396 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 MMAAQ8IVH4 418 aaKnown RBP7.04□□□□□ -1.28
SMC1A-201ENST00000322213 GAB3Q8WWW8 586 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 NCSTNQ92542 709 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 CREB3L1Q96BA8 519 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 FBXL8Q96CD0 374 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 KCTD15Q96SI1 283 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-201ENST00000322213 TBCDQ9BTW9 1192 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 GPR63Q9BZJ6 419 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 MMP27Q9H306 513 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 PRMT7Q9NVM4 692 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-201ENST00000322213 TAS2R9Q9NYW1 312 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 RGS17Q9UGC6 210 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-201ENST00000322213 PLD2O14939 933 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 CABYRO75952 493 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 FAM86B2P0C5J1 330 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 HGFP14210 728 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 NPR2P20594 1047 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 PCSK1P29120 753 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 TPRG1LQ5T0D9 272 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 GALNT7Q86SF2 657 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 GPR180Q86V85 440 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 PTCD2Q8WV60 388 aaKnown RBP7.04□□□□□ -1.28
SMC1A-201ENST00000322213 CPNE5Q9HCH3 593 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 KCNU1A8MYU2 1149 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 NOS3P29474 1203 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 GRK4P32298 578 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 BST2Q10589 180 aaKnown RBP7.04□□□□□ -1.28
SMC1A-201ENST00000322213 FGD3Q5JSP0 725 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 COLEC12Q5KU26 742 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 PHC2Q8IXK0 858 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 SLC7A5P1Q8MH63 180 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 STAG3L4Q8TBR4 150 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 ITCHQ96J02 903 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 C2orf49Q9BVC5 232 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-201ENST00000322213 SEC22BO75396 215 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 COL6A2P12110 1019 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 CREB1P16220 341 aa7.04□□□□□ -1.28
SMC1A-201ENST00000322213 S100A3P33764 101 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms