RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 CNPY3Q9BT09 278 aa13.21□□□□□ -0.29
SYCN-201ENST00000318438 TRIM55Q9BYV6 548 aa13.21□□□□□ -0.29
SYCN-201ENST00000318438 ATP13A1Q9HD20 1204 aa13.21□□□□□ -0.29
SYCN-201ENST00000318438 APMAPQ9HDC9 416 aa13.21□□□□□ -0.29
SYCN-201ENST00000318438 PARVAQ9NVD7 372 aa13.21□□□□□ -0.29
SYCN-201ENST00000318438 IFNKQ9P0W0 207 aa13.21□□□□□ -0.29
SYCN-201ENST00000318438 SLC5A6Q9Y289 635 aa13.21□□□□□ -0.29
SYCN-201ENST00000318438 PCDHB3Q9Y5E6 796 aa13.21□□□□□ -0.29
SYCN-201ENST00000318438 BZW2Q9Y6E2 419 aaKnown RBP13.21□□□□□ -0.29
SYCN-201ENST00000318438 RPS6KL1Q9Y6S9 549 aa13.21□□□□□ -0.29
SYCN-201ENST00000318438 DDX3XO00571 662 aaKnown RBP eCLIP13.2□□□□□ -0.3
SYCN-201ENST00000318438 CD160O95971 181 aa13.2□□□□□ -0.3
SYCN-201ENST00000318438 GYPCP04921 128 aa13.2□□□□□ -0.3
SYCN-201ENST00000318438 TDRD12Q587J7 1177 aaKnown RBP13.2□□□□□ -0.3
SYCN-201ENST00000318438 HGSNATQ68CP4 663 aa13.2□□□□□ -0.3
SYCN-201ENST00000318438 SLFN11Q7Z7L1 901 aa13.2□□□□□ -0.3
SYCN-201ENST00000318438 C17orf82Q86X59 251 aaPredicted RBP13.2□□□□□ -0.3
SYCN-201ENST00000318438 PLPP6Q8IY26 295 aa13.2□□□□□ -0.3
SYCN-201ENST00000318438 TTC13Q8NBP0 860 aa13.2□□□□□ -0.3
SYCN-201ENST00000318438 PLA2G15Q8NCC3 412 aa13.2□□□□□ -0.3
SYCN-201ENST00000318438 OR56A4Q8NGH8 313 aa13.2□□□□□ -0.3
SYCN-201ENST00000318438 ZDHHC1Q8WTX9 485 aa13.2□□□□□ -0.3
SYCN-201ENST00000318438 PATE1Q8WXA2 126 aa13.2□□□□□ -0.3
SYCN-201ENST00000318438 ISG20Q96AZ6 181 aaKnown RBP13.2□□□□□ -0.3
SYCN-201ENST00000318438 TRIM11Q96F44 468 aa13.2□□□□□ -0.3
SYCN-201ENST00000318438 POM121Q96HA1 1249 aa13.2□□□□□ -0.3
SYCN-201ENST00000318438 SLC29A3Q9BZD2 475 aa13.2□□□□□ -0.3
SYCN-201ENST00000318438 TSPY26PQ9H489 355 aa13.2□□□□□ -0.3
SYCN-201ENST00000318438 RCOR3Q9P2K3 495 aaPredicted RBP13.2□□□□□ -0.3
SYCN-201ENST00000318438 CAPN11Q9UMQ6 739 aa13.2□□□□□ -0.3
SYCN-201ENST00000318438 TMEM184BQ9Y519 407 aaPredicted RBP13.2□□□□□ -0.3
SYCN-201ENST00000318438 TNRC6AQ8NDV7 1962 aaKnown RBP13.2□□□□□ -0.3
SYCN-201ENST00000318438 CCDC168Q8NDH2 2452 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 IGHV1OR21-1A0A087WYE8 117 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 CXorf51AA0A1B0GTR3 108 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 CDC14CA4D256 554 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 A8MU76 341 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 FAM72CH0Y354 149 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 ATMINO43313 823 aaPredicted RBP13.19□□□□□ -0.3
SYCN-201ENST00000318438 LRIG2O94898 1065 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 ECEL1O95672 775 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 DLGAP3O95886 979 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 FTLP02792 175 aaPredicted RBP13.19□□□□□ -0.3
SYCN-201ENST00000318438 FGF1P05230 155 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 PLEKP08567 350 aaPredicted RBP13.19□□□□□ -0.3
SYCN-201ENST00000318438 MYBL1P10243 752 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 SKILP12757 684 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 RHOQP17081 205 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 DLSTP36957 453 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 MAPKAPK2P49137 400 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 PGDP52209 483 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 MC2RQ01718 297 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 OGDHQ02218 1023 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 GNA12Q03113 381 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 SNAP47Q5SQN1 464 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 ATXN7L2Q5T6C5 722 aaPredicted RBP13.19□□□□□ -0.3
SYCN-201ENST00000318438 FAM72AQ5TYM5 149 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 FAM72DQ6L9T8 149 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 RWDD4Q6NW29 188 aaKnown RBP13.19□□□□□ -0.3
SYCN-201ENST00000318438 CEACAM20Q6UY09 585 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 NLRP14Q86W24 1093 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 FAM72BQ86X60 149 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.19□□□□□ -0.3
SYCN-201ENST00000318438 FNIP1Q8TF40 1166 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 FUBP1Q96AE4 644 aaKnown RBP13.19□□□□□ -0.3
SYCN-201ENST00000318438 TBC1D31Q96DN5 1066 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 XPO4Q9C0E2 1151 aaKnown RBP13.19□□□□□ -0.3
SYCN-201ENST00000318438 ZMYND15Q9H091 742 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 TRIT1Q9H3H1 467 aaKnown RBP13.19□□□□□ -0.3
SYCN-201ENST00000318438 SUDS3Q9H7L9 328 aaPredicted RBP13.19□□□□□ -0.3
SYCN-201ENST00000318438 TMEM248Q9NWD8 314 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 CROTQ9UKG9 612 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 LUC7L2Q9Y383 392 aaKnown RBP13.19□□□□□ -0.3
SYCN-201ENST00000318438 SCINQ9Y6U3 715 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 PCNX1Q96RV3 2341 aa13.19□□□□□ -0.3
SYCN-201ENST00000318438 ZW10O43264 779 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 CBFA2T2O43439 604 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 SERPING1P05155 500 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 ETFBP38117 255 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 GPR3P46089 330 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 BIRC2Q13490 618 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 NR6A1Q15406 480 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 MYLK3Q32MK0 819 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 SCYL2Q6P3W7 929 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 GDPD4Q6W3E5 623 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 LEKR1Q6ZMV7 388 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 MCEMP1Q8IX19 187 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 DRC7Q8IY82 874 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 ESX1Q8N693 406 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 ZNF653Q96CK0 615 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 C19orf60Q96EN9 201 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 OSBPL1AQ9BXW6 950 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 ISCUQ9H1K1 167 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 CNOT8Q9UFF9 292 aaKnown RBP13.18□□□□□ -0.3
SYCN-201ENST00000318438 MOSPD1Q9UJG1 213 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 FZD10Q9ULW2 581 aa13.18□□□□□ -0.3
SYCN-201ENST00000318438 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.18□□□□□ -0.3
SYCN-201ENST00000318438 TMEM191CA6NGB0 347 aa13.17□□□□□ -0.3
SYCN-201ENST00000318438 PPM1DO15297 605 aa13.17□□□□□ -0.3
SYCN-201ENST00000318438 KRT86O43790 486 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms