RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PBX2P40425 430 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 ARPC4P59998 168 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 OVGP1Q12889 678 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 PDE1CQ14123 709 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-201ENST00000317677 FSCBQ5H9T9 825 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 PPM1JQ5JR12 505 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 ALG1LQ6GMV1 187 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 ELMSAN1Q6PJG2 1045 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 DCDC5Q6ZRR9 648 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 STRA8Q7Z7C7 330 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 CMC1Q7Z7K0 106 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 NDUFAF2Q8N183 169 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 DCLK2Q8N568 766 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 PPP1R14CQ8TAE6 165 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 WFDC5Q8TCV5 224 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 ISL2Q96A47 359 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 PPP1R2P1Q96PQ5 205 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 NOTCH4Q99466 2003 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 SEMA3CQ99985 751 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 HEPHQ9BQS7 1158 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 ZBED2Q9BTP6 218 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 FSD1LQ9BXM9 530 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 ACE2Q9BYF1 805 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-201ENST00000317677 NMUR2Q9GZQ4 415 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 SLC28A3Q9HAS3 691 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 TSC22D4Q9Y3Q8 395 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 CHD7Q9P2D1 2997 aa13.06□□□□□ -0.32
CPNE1-201ENST00000317677 ANKRD36A6QL64 1941 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 A0A1B0GVM2 712 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 LOC285095A0A1B0GVY8 99 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 TCAF2A6NFQ2 919 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 ZNF701M0R085 212 aaPredicted RBP13.05□□□□□ -0.32
CPNE1-201ENST00000317677 KDELR3O43731 214 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 OXSR1O95747 527 aaPredicted RBP13.05□□□□□ -0.32
CPNE1-201ENST00000317677 C8AP07357 584 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 FOSL2P15408 326 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 PEX2P28328 305 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 PMLP29590 882 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 CRHR1P34998 444 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 CPOXP36551 454 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 ALDH3B2P48448 385 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 CCR3P51677 355 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 LIMK2P53671 638 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 CREMQ03060 361 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 BTKQ06187 659 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 SIRPB2Q5JXA9 342 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 GRTP1Q5TC63 336 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 NIPAL1Q6NVV3 410 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 PGM2L1Q6PCE3 622 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 ITIH5Q86UX2 942 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 KREMEN2Q8NCW0 462 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 STARD8Q92502 1023 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 BORCS5Q969J3 196 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 ATXN7L3BQ96GX2 97 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 ZNF599Q96NL3 588 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 TCF25Q9BQ70 676 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 HAUS8Q9BT25 410 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 SPON2Q9BUD6 331 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 MECRQ9BV79 373 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 UNKQ9C0B0 810 aaKnown RBP13.05□□□□□ -0.32
CPNE1-201ENST00000317677 RETREG1Q9H6L5 497 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 MRM3Q9HC36 420 aaKnown RBP13.05□□□□□ -0.32
CPNE1-201ENST00000317677 VPS45Q9NRW7 570 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 C6orf203Q9P0P8 240 aaPredicted RBP13.05□□□□□ -0.32
CPNE1-201ENST00000317677 ILVBLA1L0T0 632 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 RHOCP08134 193 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 ZNF23P17027 643 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 HDCP19113 662 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 BGNP21810 368 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 CCR2P41597 374 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 CSRP3P50461 194 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 PGGT1BP53609 377 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 ARF5P84085 180 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 MYBPC1Q00872 1141 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 CYTH1Q15438 398 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 SEPT7Q16181 437 aaKnown RBP13.05□□□□□ -0.32
CPNE1-201ENST00000317677 CNGA3Q16281 694 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 NDUFA5Q16718 116 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 ZNF829Q3KNS6 432 aaPredicted RBP13.05□□□□□ -0.32
CPNE1-201ENST00000317677 IL23RQ5VWK5 629 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 PLPP4Q5VZY2 271 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 IL31Q6EBC2 164 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 FSTL4Q6MZW2 842 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 C16orf46Q6P387 395 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 TTC7BQ86TV6 843 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 FAM217AQ8IXS0 508 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 PPHLN1Q8NEY8 458 aaKnown RBP13.05□□□□□ -0.32
CPNE1-201ENST00000317677 FBXO27Q8NI29 283 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 MYLIPQ8WY64 445 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 BHMTQ93088 406 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 RAD9AQ99638 391 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 MGME1Q9BQP7 344 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 CAB39LQ9H9S4 337 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 PALMDQ9NP74 551 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 HCFC1R1Q9NWW0 138 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 DTNAQ9Y4J8 743 aa13.05□□□□□ -0.32
CPNE1-201ENST00000317677 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-201ENST00000317677 E2F8A0AVK6 867 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 C2orf71A6NGG8 1288 aa13.04□□□□□ -0.32
CPNE1-201ENST00000317677 TXNDC9O14530 226 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms