RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 CYB5D2Q8WUJ1 264 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 SORCS1Q8WY21 1168 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 KCNK13Q9HB14 408 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 ABCF3Q9NUQ8 709 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 XPR1Q9UBH6 696 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 APPL1Q9UKG1 709 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 CDH7Q9ULB5 785 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 A0A0G2JND7 137 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 UBA6A0AVT1 1052 aaPredicted RBP16.68■□□□□ 0.26
CLCF1-201ENST00000312438 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.68■□□□□ 0.26
CLCF1-201ENST00000312438 TK2O00142 265 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 SRP72O76094 671 aaKnown RBP16.68■□□□□ 0.26
CLCF1-201ENST00000312438 FMO4P31512 558 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 PPARGP37231 505 aaPredicted RBP16.68■□□□□ 0.26
CLCF1-201ENST00000312438 PTGER3P43115 390 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 ABCE1P61221 599 aaKnown RBP16.68■□□□□ 0.26
CLCF1-201ENST00000312438 CCDC15Q0P6D6 951 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 SETDB1Q15047 1291 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 ATAT1Q5SQI0 421 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 TAS2R42Q7RTR8 314 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 C12orf40Q86WS4 652 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 FITM2Q8N6M3 262 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 CHST14Q8NCH0 376 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.68■□□□□ 0.26
CLCF1-201ENST00000312438 ZFYVE19Q96K21 471 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 FAM96AQ9H5X1 160 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 ECT2Q9H8V3 914 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 SYTL2Q9HCH5 934 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 TAS2R13Q9NYV9 303 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 FNDC3AQ9Y2H6 1198 aaKnown RBP16.68■□□□□ 0.26
CLCF1-201ENST00000312438 TTC34A8MYJ7 566 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 TMEM114B3SHH9 223 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 ANKRD65E5RJM6 399 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 LINC01565O15544 149 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 ITM2AO43736 263 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 UGT2B4P06133 528 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 ADARP55265 1226 aaKnown RBP16.67■□□□□ 0.26
CLCF1-201ENST00000312438 CORO7P57737 925 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 ST8SIA6P61647 398 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 TIAL1Q01085 375 aaKnown RBP eCLIP16.67■□□□□ 0.26
CLCF1-201ENST00000312438 ASPHQ12797 758 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 LIPMQ5VYY2 423 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 TANGO2Q6ICL3 276 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 BRAT1Q6PJG6 821 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 CRTC1Q6UUV9 634 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 TMEM207Q6UWW9 146 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 STK40Q8N2I9 435 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 PIWIL2Q8TC59 973 aaKnown RBP16.67■□□□□ 0.26
CLCF1-201ENST00000312438 ANKRD49Q8WVL7 239 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 MYLIPQ8WY64 445 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 LRRC37BQ96QE4 947 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 MCCC1Q96RQ3 725 aaPredicted RBP16.67■□□□□ 0.26
CLCF1-201ENST00000312438 TTC1Q99614 292 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 SIKE1Q9BRV8 207 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 ELOVL2Q9NXB9 296 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 KCNK4Q9NYG8 393 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 DEC1Q9P2X7 70 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 PLA2G4CQ9UP65 541 aa16.67■□□□□ 0.26
CLCF1-201ENST00000312438 NPIPB15A6NHN6 443 aaPredicted RBP16.66■□□□□ 0.26
CLCF1-201ENST00000312438 RHOBTB1O94844 696 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 CD9P21926 228 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 FCARP24071 287 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 BMP8BP34820 402 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 PDAP1Q13442 181 aaKnown RBP16.66■□□□□ 0.26
CLCF1-201ENST00000312438 PTPRNQ16849 979 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 GRAMD4Q6IC98 578 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 WDR75Q8IWA0 830 aaKnown RBP16.66■□□□□ 0.26
CLCF1-201ENST00000312438 LRIG1Q96JA1 1093 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 KLHL32Q96NJ5 620 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 BIRC8Q96P09 236 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 BRD9Q9H8M2 597 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 IL26Q9NPH9 171 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 CDH22Q9UJ99 828 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 COMMD10Q9Y6G5 202 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 GBF1Q92538 1859 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 DLX3O60479 287 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 LYPLA1O75608 230 aaPredicted RBP16.66■□□□□ 0.26
CLCF1-201ENST00000312438 BMP1P13497 986 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 PKMP14618 531 aaKnown RBP16.66■□□□□ 0.26
CLCF1-201ENST00000312438 SLC6A11P48066 632 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 ADAM15Q13444 863 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 GALNTL6Q49A17 601 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 TECRLQ5HYJ1 363 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 SNX20Q7Z614 316 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 PIM3Q86V86 326 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 CCDC126Q96EE4 140 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 GATA5Q9BWX5 397 aaPredicted RBP16.66■□□□□ 0.26
CLCF1-201ENST00000312438 TMEM120AQ9BXJ8 343 aa16.66■□□□□ 0.26
CLCF1-201ENST00000312438 ACTR5Q9H9F9 607 aaPredicted RBP16.66■□□□□ 0.26
CLCF1-201ENST00000312438 CHD7Q9P2D1 2997 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 CHD9Q3L8U1 2897 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 OTOL1A6NHN0 477 aaPredicted RBP16.65■□□□□ 0.26
CLCF1-201ENST00000312438 A8MX80 341 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 PRAMEF1O95521 474 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 PYGLP06737 847 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 KITP10721 976 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 BPIP17213 487 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 ITGALP20701 1170 aa16.65■□□□□ 0.26
CLCF1-201ENST00000312438 ATP5F1P24539 256 aaPredicted RBP16.65■□□□□ 0.26
CLCF1-201ENST00000312438 SPAM1P38567 509 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms