RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 FBXO44Q9H4M3 255 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 COQ10BQ9H8M1 238 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 VPS45Q9NRW7 570 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 VANGL2Q9ULK5 521 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 COPG1Q9Y678 874 aaKnown RBP10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 ABHD14A-ACY1A0A1B0GW23 586 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 TRIM64CA6NLI5 447 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 ERI2A8K979 691 aaKnown RBP10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 H7C4K7 107 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 IGLV3-25P01717 112 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 SBK3P0C264 359 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 HAPLN1P10915 354 aaPredicted RBP10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 CCR1P32246 355 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 NPY2RP49146 381 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 CCR3P51677 355 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 PSME3P61289 254 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 SCAPQ12770 1279 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 PTK2BQ14289 1009 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 DLG2Q15700 870 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 SMAD1Q15797 465 aaKnown RBP10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 PAOXQ6QHF9 649 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 LSMEM2Q8N112 164 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 SPPL2BQ8TCT7 592 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 ZNF689Q96CS4 500 aaPredicted RBP10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 GPR22Q99680 433 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 GPATCH1Q9BRR8 931 aaKnown RBP10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 CAB39LQ9H9S4 337 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 CXXC1Q9P0U4 656 aaPredicted RBP10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 TLK1Q9UKI8 766 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 CDH7Q9ULB5 785 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 SLC8A2Q9UPR5 921 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 RAD54BQ9Y620 910 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 MYO16Q9Y6X6 1858 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 TRPC5OSA6NMA1 111 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 TARM1B6A8C7 271 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 STX16-NPEPL1H3BU86 382 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 TNFRSF10AO00220 468 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 SCAMP3O14828 347 aaKnown RBP10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 PFDN6O15212 129 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 NPHS1O60500 1241 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 SYN1P17600 705 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 SLC7A1P30825 629 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 POLD2P49005 469 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 EIF4EBP2Q13542 120 aaPredicted RBP10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 C16orf72Q14CZ0 275 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 FAAH2Q6GMR7 532 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 LPCAT2Q7L5N7 544 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 PID1Q7Z2X4 250 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 CYP2U1Q7Z449 544 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 KCNMB4Q86W47 210 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 ATP6V1E2Q96A05 226 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 ATXN7L3BQ96GX2 97 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 VPS39Q96JC1 886 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 ZNF558Q96NG5 402 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 SMOC2Q9H3U7 446 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 TASP1Q9H6P5 420 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 OLAHQ9NV23 265 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 MTRRQ9UBK8 725 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 PCDHGA7Q9Y5G6 932 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 HS3ST4Q9Y661 456 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 SHROOM3Q8TF72 1996 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 TCRBV3S1A0A5B6 114 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 DFFAO00273 331 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 TRIM24O15164 1050 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 MAGEA11P43364 429 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 STX5Q13190 355 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 CYTH1Q15438 398 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 MAPRE2Q15555 327 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 TMEM198Q66K66 360 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 NXNQ6DKJ4 435 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 TFAP2DQ7Z6R9 452 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 SCML4Q8N228 414 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 RNF148Q8N7C7 305 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 TERB1Q8NA31 727 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 BADQ92934 168 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 TMA16Q96EY4 203 aaKnown RBP10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 RMND5BQ96G75 393 aaPredicted RBP10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 NPAS2Q99743 824 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 CTRCQ99895 268 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 ANKRD60Q9BZ19 345 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 NDEL1Q9GZM8 345 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 SATB2Q9UPW6 733 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 ITM2BQ9Y287 266 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 EYSQ5T1H1 3165 aa10.31□□□□□ -0.76
APOBEC3F-201ENST00000308521 SLC12A8A0AV02 714 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 SLC38A8A6NNN8 435 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 SOD2P04179 222 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 RXRGP48443 463 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 EIF2B2P49770 351 aaKnown RBP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 KCNQ1P51787 676 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 NAGLUP54802 743 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 TBX4P57082 545 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 PIK3R6Q5UE93 754 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 KCTD11Q693B1 232 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 SLC8B1Q6J4K2 584 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 CHSY3Q70JA7 882 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 FRA10AC1Q70Z53 315 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 CIR1Q86X95 450 aaPredicted RBP10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 SLC39A11Q8N1S5 342 aa10.3□□□□□ -0.76
APOBEC3F-201ENST00000308521 PELI3Q8N2H9 469 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms