RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 BPIFB6Q8NFQ5 453 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 BCAS3Q9H6U6 928 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 AKAP7Q9P0M2 348 aaPredicted RBP15.92■□□□□ 0.14
USP42-201ENST00000306177 NRP2O60462 931 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 POU5F1Q01860 360 aaKnown RBP15.91■□□□□ 0.14
USP42-201ENST00000306177 DSC2Q02487 901 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 DGCR6Q14129 220 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 TIGD2Q4W5G0 525 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 TSPAN14Q8NG11 270 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 PHF10Q8WUB8 498 aaKnown RBP15.91■□□□□ 0.14
USP42-201ENST00000306177 A0A0J9YYE9 177 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 KCNU1A8MYU2 1149 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 LRATO95237 230 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 UNGP13051 313 aaPredicted RBP15.91■□□□□ 0.14
USP42-201ENST00000306177 SPAM1P38567 509 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 GNA12Q03113 381 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 BIKQ13323 160 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 SH3D19Q5HYK7 790 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 CRTC3Q6UUV7 619 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 RBM23Q86U06 439 aaKnown RBP15.91■□□□□ 0.14
USP42-201ENST00000306177 NPAS4Q8IUM7 802 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 CAPNS2Q96L46 248 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 VPS35Q96QK1 796 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 MAGEH1Q9H213 219 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 WDR55Q9H6Y2 383 aaPredicted RBP15.91■□□□□ 0.14
USP42-201ENST00000306177 ARL8BQ9NVJ2 186 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 EVLQ9UI08 416 aaPredicted RBP15.91■□□□□ 0.14
USP42-201ENST00000306177 A0A1B0GVM2 712 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.91■□□□□ 0.14
USP42-201ENST00000306177 TCAF2A6NFQ2 919 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 PTGIRP43119 386 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 NDST2P52849 883 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 CSNK2BP67870 215 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 CAPN13Q6MZZ7 669 aaPredicted RBP15.91■□□□□ 0.14
USP42-201ENST00000306177 KIAA0408Q6ZU52 694 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 DEPDC4Q8N2C3 294 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 NXNL1Q96CM4 212 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 Q96MT0 163 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 SLC9A7Q96T83 725 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 MAGEL2Q9UJ55 1249 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 PRDM4Q9UKN5 801 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 FZD10Q9ULW2 581 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 DHX15O43143 795 aaKnown RBP15.91■□□□□ 0.14
USP42-201ENST00000306177 PDE9AO76083 593 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 PBX3P40426 434 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 MAPK10P53779 464 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 DLG2Q15700 870 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 ISLR2Q6UXK2 745 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 ARMC8Q8IUR7 673 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 ZBTB2Q8N680 514 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 BEND7Q8N7W2 519 aaPredicted RBP15.91■□□□□ 0.14
USP42-201ENST00000306177 SLAIN1Q8ND83 568 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 CCDC28BQ9BUN5 200 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 SSU72Q9NP77 194 aaKnown RBP15.91■□□□□ 0.14
USP42-201ENST00000306177 CLN6Q9NWW5 311 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 LGALS13Q9UHV8 139 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 IKZF3Q9UKT9 509 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 SLC9A8Q9Y2E8 581 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 LYVE1Q9Y5Y7 322 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 DUOX1Q9NRD9 1551 aa15.91■□□□□ 0.14
USP42-201ENST00000306177 MYBPHLA2RUH7 354 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 H0Y858 1186 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 OR10H2O60403 315 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 STX11O75558 287 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 DNTTP04053 509 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 UGT2B4P06133 528 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 PTSQ03393 145 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 ATP1A4Q13733 1029 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 CBX2Q14781 532 aaPredicted RBP15.9■□□□□ 0.14
USP42-201ENST00000306177 RTL3Q8N8U3 475 aaKnown RBP15.9■□□□□ 0.14
USP42-201ENST00000306177 NPAS2Q99743 824 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 DNAJC28Q9NX36 388 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 ROBO1Q9Y6N7 1651 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 KLF10Q13118 480 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 PPCDCQ96CD2 204 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 OSBPL11Q9BXB4 747 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 AASDHPPTQ9NRN7 309 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 GEMIN8Q9NWZ8 242 aaKnown RBP15.9■□□□□ 0.14
USP42-201ENST00000306177 GSTK1Q9Y2Q3 226 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 RPTORQ8N122 1335 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 ERAL1O75616 437 aaKnown RBP15.9■□□□□ 0.14
USP42-201ENST00000306177 VNN1O95497 513 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 EOMESO95936 686 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 HOXB6P17509 224 aaKnown RBP15.9■□□□□ 0.14
USP42-201ENST00000306177 NDUFV1P49821 464 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 C21orf59P57076 290 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 CLNKQ7Z7G1 428 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 CACTIN-AS1Q8N1I8 211 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 DEC1Q9P2X7 70 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 TRIM43BA6NCK2 446 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 SERPINB7O75635 380 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 CCNA2P20248 432 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 LMO2P25791 158 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 USP46P62068 366 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 VARS2Q5ST30 1063 aaKnown RBP15.9■□□□□ 0.14
USP42-201ENST00000306177 ZYG11AQ6WRX3 759 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 TDRPQ86YL5 185 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 BRI3BPQ8WY22 251 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 MFSD3Q96ES6 412 aa15.9■□□□□ 0.14
USP42-201ENST00000306177 HTATIP2Q9BUP3 242 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms