RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 CIB1Q99828 191 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 ZNF490Q9ULM2 529 aaPredicted RBP13.91□□□□□ -0.18
PRKCB-201ENST00000303531 STON1Q9Y6Q2 735 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 DISP2A7MBM2 1401 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 TMCC2O75069 709 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 MMP3P08254 477 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 CCNYL3P0C7X3 344 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 AMD1P17707 334 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 NDUFA5Q16718 116 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 TSSK3Q96PN8 268 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 CCNB1IP1Q9NPC3 277 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 LSM12Q3MHD2 195 aaKnown RBP13.91□□□□□ -0.18
PRKCB-201ENST00000303531 CYP4X1Q8N118 509 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 C12orf50Q8NA57 414 aaPredicted RBP13.91□□□□□ -0.18
PRKCB-201ENST00000303531 S100ZQ8WXG8 99 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 POP5Q969H6 163 aaKnown RBP13.91□□□□□ -0.18
PRKCB-201ENST00000303531 AARSD1Q9BTE6 412 aaKnown RBP13.91□□□□□ -0.18
PRKCB-201ENST00000303531 SDCBP2Q9H190 292 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 OR10H1Q9Y4A9 318 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 AP2A1O95782 977 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 BMP7P18075 431 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 CXCR3P49682 368 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 TAF10Q12962 218 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 KRT74Q7RTS7 529 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 PPM1MQ96MI6 270 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 ZNF607Q96SK3 696 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 PLSCR1O15162 318 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 SLC28A2O43868 658 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 ITPKAP23677 461 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 RCVRNP35243 200 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 MPP1Q00013 466 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 DUSP4Q13115 394 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 ANKS1BQ7Z6G8 1248 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 CCDC185Q8N715 623 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 TEX47Q8TBZ9 253 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 MCRS1Q96EZ8 462 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 PDZD7Q9H5P4 517 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 AP3D1O14617 1153 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 OR4Q2P0C623 313 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 PPIBP23284 216 aaKnown RBP13.91□□□□□ -0.18
PRKCB-201ENST00000303531 CDK9P50750 372 aaKnown RBP13.91□□□□□ -0.18
PRKCB-201ENST00000303531 POLR2JP52435 117 aaKnown RBP13.91□□□□□ -0.18
PRKCB-201ENST00000303531 GRM3Q14832 879 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 TMEM63BQ5T3F8 832 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 AGMOQ6ZNB7 445 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 TWIST2Q8WVJ9 160 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 KLRG1Q96E93 195 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 KIFC1Q9BW19 673 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 GMIPQ9P107 970 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 FADS3Q9Y5Q0 445 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 RIMBP3CA6NJZ7 1639 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 RIMBP3BA6NNM3 1639 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 RIMBP3Q9UFD9 1639 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 KCNU1A8MYU2 1149 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 E9PAM4 449 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 SLC35G4P0C7Q5 338 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 ELFN1P0C7U0 828 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 PARP15Q460N3 678 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 CRTC3Q6UUV7 619 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 PTCHD4Q6ZW05 846 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 ZNF483Q8TF39 744 aaPredicted RBP13.9□□□□□ -0.18
PRKCB-201ENST00000303531 CCDC28BQ9BUN5 200 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 AGRPO00253 132 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 MDM4O15151 490 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 PKMP14618 531 aaKnown RBP13.9□□□□□ -0.18
PRKCB-201ENST00000303531 OR1D2P34982 312 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 ZYG11AQ6WRX3 759 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 EEF1AKMT1Q8WVE0 214 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 CLP1Q92989 425 aaKnown RBP13.9□□□□□ -0.18
PRKCB-201ENST00000303531 FERD3LQ96RJ6 166 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 ZNF180Q9UJW8 692 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 SAMD4AQ9UPU9 718 aaKnown RBP13.9□□□□□ -0.18
PRKCB-201ENST00000303531 ISM1B1AKI9 464 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 ARL2P36404 184 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 MAPKAPK2P49137 400 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 SLC20A2Q08357 652 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 DUSP28Q4G0W2 176 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 OR2T34Q8NGX1 318 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 OR2T3Q8NH03 318 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 NARS2Q96I59 477 aaKnown RBP13.9□□□□□ -0.18
PRKCB-201ENST00000303531 ACAT2Q9BWD1 397 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 TIMM22Q9Y584 194 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 RPTORQ8N122 1335 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 SHOX2O60902 331 aaPredicted RBP13.9□□□□□ -0.18
PRKCB-201ENST00000303531 CLDN11O75508 207 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 LRIG2O94898 1065 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 INHBEP58166 350 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 GLYATQ6IB77 296 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 DENND5AQ6IQ26 1287 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.9□□□□□ -0.18
PRKCB-201ENST00000303531 LDB1Q86U70 411 aaPredicted RBP13.9□□□□□ -0.18
PRKCB-201ENST00000303531 RALGPS2Q86X27 583 aaPredicted RBP13.9□□□□□ -0.18
PRKCB-201ENST00000303531 LGALS13Q9UHV8 139 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 PRMT5O14744 637 aaPredicted RBP13.9□□□□□ -0.18
PRKCB-201ENST00000303531 ADH1AP07327 375 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 MTHFRP42898 656 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 PTGIRP43119 386 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 KLHL12Q53G59 568 aa13.9□□□□□ -0.18
PRKCB-201ENST00000303531 ARL13AQ5H913 290 aaPredicted RBP13.9□□□□□ -0.18
PRKCB-201ENST00000303531 CPTPQ5TA50 214 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms