RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 CERS6Q6ZMG9 384 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 UBE2Q1Q7Z7E8 422 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 EFHBQ8N7U6 833 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 ENDOVQ8N8Q3 282 aaKnown RBP19.36■□□□□ 0.69
HOXC4-201ENST00000303406 SH3RF2Q8TEC5 729 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 SLC22A17Q8WUG5 538 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.36■□□□□ 0.69
HOXC4-201ENST00000303406 PTERQ96BW5 349 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 ALG9Q9H6U8 611 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 TMCO1Q9UM00 188 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 MED16Q9Y2X0 877 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 UBA6A0AVT1 1052 aaPredicted RBP19.35■□□□□ 0.69
HOXC4-201ENST00000303406 NEMP2A6NFY4 417 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 ZBTB14O43829 449 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 PEX11AO75192 247 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 VPS26AO75436 327 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 TM7SF2O76062 418 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 HNRNPA1P09651 372 aaKnown RBP eCLIP19.35■□□□□ 0.69
HOXC4-201ENST00000303406 NCF2P19878 526 aaPredicted RBP19.35■□□□□ 0.69
HOXC4-201ENST00000303406 KCNA5P22460 613 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 CCR10P46092 362 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 RAD51Q06609 339 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 KLF10Q13118 480 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 ZNF678Q5SXM1 525 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 RAB44Q7Z6P3 723 aaPredicted RBP19.35■□□□□ 0.69
HOXC4-201ENST00000303406 CMTM8Q8IZV2 173 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 PNPLA1Q8N8W4 532 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 SPPL3Q8TCT6 385 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 BADQ92934 168 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 KIAA1191Q96A73 305 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 OR52B2Q96RD2 323 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 TUBGCP5Q96RT8 1024 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 ATOH8Q96SQ7 321 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 GPR63Q9BZJ6 419 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 UNKQ9C0B0 810 aaKnown RBP19.35■□□□□ 0.69
HOXC4-201ENST00000303406 GSTO2Q9H4Y5 243 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 DENND2DQ9H6A0 471 aaPredicted RBP19.35■□□□□ 0.69
HOXC4-201ENST00000303406 ZNF385DQ9H6B1 395 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 ATP13A3Q9H7F0 1226 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 RNPEPL1Q9HAU8 725 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 TLR9Q9NR96 1032 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 CXXC1Q9P0U4 656 aaPredicted RBP19.35■□□□□ 0.69
HOXC4-201ENST00000303406 ZNF106Q9H2Y7 1883 aaKnown RBP19.35■□□□□ 0.69
HOXC4-201ENST00000303406 A0A0J9YYE9 177 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 HIDE1A8MVS5 230 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 NRG2O14511 850 aaPredicted RBP19.35■□□□□ 0.69
HOXC4-201ENST00000303406 SMAD6O43541 496 aaKnown RBP19.35■□□□□ 0.69
HOXC4-201ENST00000303406 KERAO60938 352 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 MOSPD3O75425 235 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 TRBC1P01850 177 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 ESR1P03372 595 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 GJA1P17302 382 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 FMO4P31512 558 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 CD70P32970 193 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 CPOXP36551 454 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 PPARGP37231 505 aaPredicted RBP19.35■□□□□ 0.69
HOXC4-201ENST00000303406 CCR2P41597 374 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 CPA2P48052 419 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 PTPN5P54829 565 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 INHBCP55103 352 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 SULT2A1Q06520 285 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 HERC3Q15034 1050 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 LSM12Q3MHD2 195 aaKnown RBP19.35■□□□□ 0.69
HOXC4-201ENST00000303406 SETMARQ53H47 684 aaPredicted RBP19.35■□□□□ 0.69
HOXC4-201ENST00000303406 PITRM1Q5JRX3 1037 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 PLPP4Q5VZY2 271 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 PSAPL1Q6NUJ1 521 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 OR2AP1Q8NGE2 309 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 STAG3L4Q8TBR4 150 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 GRIN3AQ8TCU5 1115 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 POF1BQ8WVV4 589 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 KCNJ9Q92806 393 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 BIRC8Q96P09 236 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 LYSMD1Q96S90 227 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 CEP44Q9C0F1 390 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 CD248Q9HCU0 757 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 INTS6Q9UL03 887 aaKnown RBP19.35■□□□□ 0.69
HOXC4-201ENST00000303406 HS3ST2Q9Y278 367 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 PCDHB1Q9Y5F3 818 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 SLC4A7Q9Y6M7 1214 aa19.35■□□□□ 0.69
HOXC4-201ENST00000303406 GOLGA8CPA6NN73 597 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 C5orf67F2Z3F1 127 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 K7ERQ8 282 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 GRM6O15303 877 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 TLL1O43897 1013 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 ZNF821O75541 412 aaPredicted RBP19.34■□□□□ 0.69
HOXC4-201ENST00000303406 PRSS56P0CW18 603 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 RPS3P23396 243 aaKnown RBP eCLIP19.34■□□□□ 0.69
HOXC4-201ENST00000303406 SNRPD1P62314 119 aaKnown RBP19.34■□□□□ 0.69
HOXC4-201ENST00000303406 HERVK_113P63132 956 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 DMC1Q14565 340 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 PTPRNQ16849 979 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 ZRANB3Q5FWF4 1079 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 LYPLAL1Q5VWZ2 237 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 UGT3A1Q6NUS8 523 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 TPGS1Q6ZTW0 290 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 CUZD1Q86UP6 607 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 PIANPQ8IYJ0 282 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 CBARPQ8N350 705 aaPredicted RBP19.34■□□□□ 0.69
HOXC4-201ENST00000303406 ACTRT2Q8TDY3 377 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms