RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 MTHFD2P13995 350 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 FDXRP22570 491 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 PCSK6P29122 969 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 SOX11P35716 441 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 GATMP50440 423 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 IL10RBQ08334 325 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 PTPRRQ15256 657 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 TRIP4Q15650 581 aaPredicted RBP12.88□□□□□ -0.35
HIF3A-204ENST00000300862 VPS26BQ4G0F5 336 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 TMEM259Q4ZIN3 620 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 FAM45BPQ6NSW5 357 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 RSPO2Q6UXX9 243 aaPredicted RBP12.88□□□□□ -0.35
HIF3A-204ENST00000300862 FAM45AQ8TCE6 357 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 SPON2Q9BUD6 331 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 POLR1EQ9GZS1 481 aaKnown RBP12.88□□□□□ -0.35
HIF3A-204ENST00000300862 Q9H521 79 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 RHBDL2Q9NX52 303 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 SUCOQ9UBS9 1254 aaKnown RBP12.88□□□□□ -0.35
HIF3A-204ENST00000300862 IKZF3Q9UKT9 509 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 A0A0J9YVX5 310 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 C7orf72A4D263 438 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 CCDC160A6NGH7 325 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 NCF1BA6NI72 391 aaPredicted RBP12.87□□□□□ -0.35
HIF3A-204ENST00000300862 ZNF839A8K0R7 811 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 NCF1CA8MVU1 366 aaPredicted RBP12.87□□□□□ -0.35
HIF3A-204ENST00000300862 NT5C1B-RDH14C9J2C7 533 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 ZSCAN9O15535 394 aaPredicted RBP12.87□□□□□ -0.35
HIF3A-204ENST00000300862 LINC00032P0C843 101 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 CDK4P11802 303 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 GFAPP14136 432 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 NCF1P14598 390 aaPredicted RBP12.87□□□□□ -0.35
HIF3A-204ENST00000300862 ZNF37AP17032 561 aaPredicted RBP12.87□□□□□ -0.35
HIF3A-204ENST00000300862 CHRM3P20309 590 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 FMO4P31512 558 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 CDKN1CP49918 316 aaPredicted RBP12.87□□□□□ -0.35
HIF3A-204ENST00000300862 MAPRE2Q15555 327 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 MTX3Q5HYI7 312 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 C6orf10Q5SRN2 563 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 HERC6Q8IVU3 1022 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 LGI2Q8N0V4 545 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 KLHL23Q8NBE8 558 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 TADA1Q96BN2 335 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 L3HYPDHQ96EM0 354 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 FAM193BQ96PV7 902 aaPredicted RBP12.87□□□□□ -0.35
HIF3A-204ENST00000300862 SLC25A23Q9BV35 468 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 CROTQ9UKG9 612 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 RAB26Q9ULW5 256 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 SPO11Q9Y5K1 396 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 COQ9O75208 318 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 CKBP12277 381 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 ZNF26P17031 533 aaPredicted RBP12.87□□□□□ -0.35
HIF3A-204ENST00000300862 GPX3P22352 226 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 RGRP47804 291 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 APOFQ13790 326 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 CAPRIN1Q14444 709 aaKnown RBP12.87□□□□□ -0.35
HIF3A-204ENST00000300862 PAQR3Q6TCH7 311 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 SLC24A5Q71RS6 500 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 CLYBLQ8N0X4 340 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 OR4L1Q8NH43 312 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 FUBP3Q96I24 572 aaKnown RBP eCLIP12.87□□□□□ -0.35
HIF3A-204ENST00000300862 SLC29A1Q99808 456 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 CIB1Q99828 191 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 MRPS26Q9BYN8 205 aaKnown RBP12.87□□□□□ -0.35
HIF3A-204ENST00000300862 TUBB1Q9H4B7 451 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 NOL11Q9H8H0 719 aaKnown RBP12.87□□□□□ -0.35
HIF3A-204ENST00000300862 SEMA4BQ9NPR2 832 aaPredicted RBP12.87□□□□□ -0.35
HIF3A-204ENST00000300862 CATSPERZQ9NTU4 200 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 FNIP2Q9P278 1114 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 GMEB1Q9Y692 573 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 LAMA3Q16787 3333 aa12.87□□□□□ -0.35
HIF3A-204ENST00000300862 A0A0J9YYE9 177 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 PRAMEF11O60813 436 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 TIPRLO75663 272 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 RPP40O75818 363 aaKnown RBP12.86□□□□□ -0.35
HIF3A-204ENST00000300862 SRP72O76094 671 aaKnown RBP12.86□□□□□ -0.35
HIF3A-204ENST00000300862 IMPDH2P12268 514 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 STX1BP61266 288 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 RHDQ02161 417 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 DUSP4Q13115 394 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 MRNIPQ6NTE8 343 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 SCIMPQ6UWF3 145 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 RNF19BQ6ZMZ0 732 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 TWIST2Q8WVJ9 160 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 ESAMQ96AP7 390 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 PPWD1Q96BP3 646 aaKnown RBP12.86□□□□□ -0.35
HIF3A-204ENST00000300862 ZNF696Q9H7X3 374 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 GALPQ9UBC7 116 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 CD300AQ9UGN4 299 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 TIMM22Q9Y584 194 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 DRGXA6NNA5 263 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 SUPT3HB4E1H0 165 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 TLR5O60602 858 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 SUPT3HO75486 399 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 PRKAR2AP13861 404 aaKnown RBP12.86□□□□□ -0.35
HIF3A-204ENST00000300862 CKMT2P17540 419 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 SLC5A2P31639 672 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 SLC6A4P31645 630 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 GRIA3P42263 894 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 GALNT1Q10472 559 aaPredicted RBP12.86□□□□□ -0.35
HIF3A-204ENST00000300862 CYTH1Q15438 398 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms