RNA–Protein interactions for RNA: ENST00000299961.5

HTR3A-201, Transcript of 5-hydroxytryptamine receptor 3A, humanhuman

TSL 2 BASIC

Gene HTR3A, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3A-201ENST00000299961 C19orf60Q96EN9 201 aa13.71□□□□□ -0.21
HTR3A-201ENST00000299961 TMA16Q96EY4 203 aaKnown RBP13.71□□□□□ -0.21
HTR3A-201ENST00000299961 MYRFLQ96LU7 910 aa13.71□□□□□ -0.21
HTR3A-201ENST00000299961 SLC25A23Q9BV35 468 aa13.71□□□□□ -0.21
HTR3A-201ENST00000299961 MUC3BQ9H195 1237 aa13.71□□□□□ -0.21
HTR3A-201ENST00000299961 EPS15L1Q9UBC2 864 aa13.71□□□□□ -0.21
HTR3A-201ENST00000299961 ADAMTS6Q9UKP5 1117 aa13.71□□□□□ -0.21
HTR3A-201ENST00000299961 TMCO1Q9UM00 188 aa13.71□□□□□ -0.21
HTR3A-201ENST00000299961 SPO11Q9Y5K1 396 aa13.71□□□□□ -0.21
HTR3A-201ENST00000299961 SRP72O76094 671 aaKnown RBP13.71□□□□□ -0.22
HTR3A-201ENST00000299961 LATS1O95835 1130 aa13.71□□□□□ -0.22
HTR3A-201ENST00000299961 EFEMP2O95967 443 aa13.71□□□□□ -0.22
HTR3A-201ENST00000299961 SNRPB2P08579 225 aaKnown RBP13.71□□□□□ -0.22
HTR3A-201ENST00000299961 FGF4P08620 206 aa13.71□□□□□ -0.22
HTR3A-201ENST00000299961 GFAPP14136 432 aa13.71□□□□□ -0.22
HTR3A-201ENST00000299961 TIAL1Q01085 375 aaKnown RBP eCLIP13.71□□□□□ -0.22
HTR3A-201ENST00000299961 PTK2BQ14289 1009 aa13.71□□□□□ -0.22
HTR3A-201ENST00000299961 GRM2Q14416 872 aa13.71□□□□□ -0.22
HTR3A-201ENST00000299961 CYTH1Q15438 398 aa13.71□□□□□ -0.22
HTR3A-201ENST00000299961 TCTN1Q2MV58 587 aa13.71□□□□□ -0.22
HTR3A-201ENST00000299961 AGKQ53H12 422 aa13.71□□□□□ -0.22
HTR3A-201ENST00000299961 RNF219Q5W0B1 726 aaPredicted RBP13.71□□□□□ -0.22
HTR3A-201ENST00000299961 PQLC1Q8N2U9 271 aa13.71□□□□□ -0.22
HTR3A-201ENST00000299961 NKAPQ8N5F7 415 aaKnown RBP13.71□□□□□ -0.22
HTR3A-201ENST00000299961 LPCAT1Q8NF37 534 aa13.71□□□□□ -0.22
HTR3A-201ENST00000299961 OR4K2Q8NGD2 314 aa13.71□□□□□ -0.22
HTR3A-201ENST00000299961 PIP4K2CQ8TBX8 421 aa13.71□□□□□ -0.22
HTR3A-201ENST00000299961 LPGAT1Q92604 370 aa13.71□□□□□ -0.22
HTR3A-201ENST00000299961 TOP1MTQ969P6 601 aa13.71□□□□□ -0.22
HTR3A-201ENST00000299961 TRMT2BQ96GJ1 504 aaKnown RBP13.71□□□□□ -0.22
HTR3A-201ENST00000299961 NPAS2Q99743 824 aa13.71□□□□□ -0.22
HTR3A-201ENST00000299961 RAI2Q9Y5P3 530 aa13.71□□□□□ -0.22
HTR3A-201ENST00000299961 LCHNA4D1U4 455 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 CBX4O00257 560 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 UBFD1O14562 309 aaKnown RBP13.7□□□□□ -0.22
HTR3A-201ENST00000299961 AP1G1O43747 822 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 BCAS2O75934 225 aaPredicted RBP13.7□□□□□ -0.22
HTR3A-201ENST00000299961 CXCL10P02778 98 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 HMGA1P17096 107 aaKnown RBP13.7□□□□□ -0.22
HTR3A-201ENST00000299961 RPL17P18621 184 aaKnown RBP13.7□□□□□ -0.22
HTR3A-201ENST00000299961 XRCC1P18887 633 aaPredicted RBP13.7□□□□□ -0.22
HTR3A-201ENST00000299961 RGRP47804 291 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 PSMD8P48556 350 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 TTPAP49638 278 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 ACADVLP49748 655 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 SH3BGRP55822 239 aaPredicted RBP13.7□□□□□ -0.22
HTR3A-201ENST00000299961 PSME3P61289 254 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 OR4D1Q15615 310 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 AARS2Q5JTZ9 985 aaKnown RBP13.7□□□□□ -0.22
HTR3A-201ENST00000299961 RARS2Q5T160 578 aaKnown RBP13.7□□□□□ -0.22
HTR3A-201ENST00000299961 REP15Q6BDI9 236 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 HACD2Q6Y1H2 254 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 RNF111Q6ZNA4 994 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 RNF168Q8IYW5 571 aaPredicted RBP13.7□□□□□ -0.22
HTR3A-201ENST00000299961 PNPLA1Q8N8W4 532 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 ATOH8Q96SQ7 321 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 KLF16Q9BXK1 252 aaPredicted RBP13.7□□□□□ -0.22
HTR3A-201ENST00000299961 TRIM4Q9C037 500 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 UNC93B1Q9H1C4 597 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 TNFRSF12AQ9NP84 129 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 POLR3BQ9NW08 1133 aaPredicted RBP13.7□□□□□ -0.22
HTR3A-201ENST00000299961 SUCOQ9UBS9 1254 aaKnown RBP13.7□□□□□ -0.22
HTR3A-201ENST00000299961 SARDHQ9UL12 918 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 RNF112Q9ULX5 631 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 COMMD10Q9Y6G5 202 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 GBF1Q92538 1859 aa13.7□□□□□ -0.22
HTR3A-201ENST00000299961 TYW5A2RUC4 315 aaKnown RBP13.69□□□□□ -0.22
HTR3A-201ENST00000299961 BBIP1A8MTZ0 92 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 SUPT3HB4E1H0 165 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 UBXN8O00124 270 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 AZIN1O14977 448 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 VPS4BO75351 444 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 VPS26AO75436 327 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 SUPT3HO75486 399 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 KLKB1P03952 638 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 IRF1P10914 325 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 CD1EP15812 388 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 PEX2P28328 305 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 FMO4P31512 558 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 KCNC1P48547 511 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 VEGFBP49765 207 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 PKNOX1P55347 436 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 PLD1Q13393 1074 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 CEACAM7Q14002 265 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 GEN1Q17RS7 908 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 OGFRL1Q5TC84 451 aaPredicted RBP13.69□□□□□ -0.22
HTR3A-201ENST00000299961 LPCAT4Q643R3 524 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 LARP4Q71RC2 724 aaKnown RBP eCLIP13.69□□□□□ -0.22
HTR3A-201ENST00000299961 RPS27LQ71UM5 84 aaKnown RBP13.69□□□□□ -0.22
HTR3A-201ENST00000299961 EFL1Q7Z2Z2 1120 aaKnown RBP13.69□□□□□ -0.22
HTR3A-201ENST00000299961 FBXO39Q8N4B4 442 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 ICA1LQ8NDH6 482 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 BHLHE22Q8NFJ8 381 aaPredicted RBP13.69□□□□□ -0.22
HTR3A-201ENST00000299961 ZNF461Q8TAF7 563 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 USP13Q92995 863 aaPredicted RBP13.69□□□□□ -0.22
HTR3A-201ENST00000299961 IGSF21Q96ID5 467 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 EXOC2Q96KP1 924 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 LRGUKQ96M69 825 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 EPB41L1Q9H4G0 881 aa13.69□□□□□ -0.22
HTR3A-201ENST00000299961 MID1IP1Q9NPA3 183 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms