RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 PTGR2Q8N8N7 351 aaPredicted RBP13.44□□□□□ -0.26
CTDP1-202ENST00000299543 ADCY4Q8NFM4 1077 aa13.44□□□□□ -0.26
CTDP1-202ENST00000299543 FAM110BQ8TC76 370 aa13.44□□□□□ -0.26
CTDP1-202ENST00000299543 TRPC4APQ8TEL6 797 aa13.44□□□□□ -0.26
CTDP1-202ENST00000299543 TUBGCP3Q96CW5 907 aa13.44□□□□□ -0.26
CTDP1-202ENST00000299543 RPL10LQ96L21 214 aaKnown RBP13.44□□□□□ -0.26
CTDP1-202ENST00000299543 C3orf30Q96M34 536 aa13.44□□□□□ -0.26
CTDP1-202ENST00000299543 TMEM79Q9BSE2 394 aa13.44□□□□□ -0.26
CTDP1-202ENST00000299543 TREX1Q9NSU2 369 aa13.44□□□□□ -0.26
CTDP1-202ENST00000299543 POU2F3Q9UKI9 436 aa13.44□□□□□ -0.26
CTDP1-202ENST00000299543 GIT1Q9Y2X7 761 aa13.44□□□□□ -0.26
CTDP1-202ENST00000299543 ACTL7AQ9Y615 435 aa13.44□□□□□ -0.26
CTDP1-202ENST00000299543 GPR182O15218 404 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 SRP72O76094 671 aaKnown RBP13.43□□□□□ -0.26
CTDP1-202ENST00000299543 UGT1A6P19224 532 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 CDH3P22223 829 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 RPL9P32969 192 aaKnown RBP13.43□□□□□ -0.26
CTDP1-202ENST00000299543 ADRA1AP35348 466 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 OR1G1P47890 313 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 TBX4P57082 545 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 ECT2LQ008S8 904 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 GNA12Q03113 381 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 BRMS1LQ5PSV4 323 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 PERM1Q5SV97 790 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 PIK3R6Q5UE93 754 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 ATAD1Q8NBU5 361 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 CATSPER1Q8NEC5 780 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 ESAMQ96AP7 390 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 NSUN5Q96P11 429 aaKnown RBP13.43□□□□□ -0.26
CTDP1-202ENST00000299543 SPON2Q9BUD6 331 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 PRKD2Q9BZL6 878 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 C1orf232A0A0U1RR37 186 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 A0A1W2PPW3 197 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 UBXN8O00124 270 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 UBFD1O14562 309 aaKnown RBP13.43□□□□□ -0.26
CTDP1-202ENST00000299543 ACOT8O14734 319 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 NRP2O60462 931 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 TSPAN3O60637 253 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 ATE1O95260 518 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 LINC00032P0C843 101 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 CHRM3P20309 590 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 CES1P23141 567 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 ZNF135P52742 658 aaPredicted RBP13.43□□□□□ -0.26
CTDP1-202ENST00000299543 MLLT6P55198 1093 aaPredicted RBP13.43□□□□□ -0.26
CTDP1-202ENST00000299543 MGAT5BQ3V5L5 792 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 FUT11Q495W5 492 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 TMEM207Q6UWW9 146 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 CFAP52Q8N1V2 620 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 TSPAN14Q8NG11 270 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 OR13C4Q8NGS5 318 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 TSPAN17Q96FV3 270 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 EXOC2Q96KP1 924 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 CEP295NLQ96MC4 621 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 SEMA3CQ99985 751 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 CEP44Q9C0F1 390 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 SLC25A51Q9H1U9 297 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 SPAG4Q9NPE6 437 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 UTP6Q9NYH9 597 aaKnown RBP13.43□□□□□ -0.26
CTDP1-202ENST00000299543 SBF1O95248 1867 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 ESRRGP62508 458 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 FAM171BQ6P995 826 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 ZBTB49Q6ZSB9 765 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 ERI1Q8IV48 349 aaKnown RBP13.43□□□□□ -0.26
CTDP1-202ENST00000299543 CNTN4Q8IWV2 1026 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 HMGCLL1Q8TB92 370 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 DPF3Q92784 378 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 RANBP9Q96S59 729 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 CYP2S1Q96SQ9 504 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 SLC29A1Q99808 456 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 SLC27A5Q9Y2P5 690 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 RNF11Q9Y3C5 154 aa13.43□□□□□ -0.26
CTDP1-202ENST00000299543 GPC6Q9Y625 555 aaPredicted RBP13.43□□□□□ -0.26
CTDP1-202ENST00000299543 AP1G1O43747 822 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 CYP2C18P33260 490 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 PLIN5Q00G26 463 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 SQLEQ14534 574 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 MAPRE2Q15555 327 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 CILP2Q8IUL8 1156 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 TTC9BQ8N6N2 239 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 OR13J1Q8NGT2 312 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 PLEKHA8Q96JA3 519 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 UNC93B1Q9H1C4 597 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 ZNF385DQ9H6B1 395 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 SEMA4BQ9NPR2 832 aaPredicted RBP13.42□□□□□ -0.26
CTDP1-202ENST00000299543 GMIPQ9P107 970 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 PLXNB2O15031 1838 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 C7orf72A4D263 438 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 CBFA2T3O75081 653 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 CLCN5P51795 746 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 NR1H2P55055 460 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 CAMK2BQ13554 666 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 SIRPB2Q5JXA9 342 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 C10orf120Q5SQS8 335 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 PRR23BQ6ZRT6 265 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 DHFR2Q86XF0 187 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 CANT1Q8WVQ1 401 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 DLG3Q92796 817 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 PTERQ96BW5 349 aa13.42□□□□□ -0.26
CTDP1-202ENST00000299543 ZFRQ96KR1 1074 aaKnown RBP13.42□□□□□ -0.26
CTDP1-202ENST00000299543 SYT17Q9BSW7 474 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms