RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 HKDC1Q2TB90 917 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 ATXN7L2Q5T6C5 722 aaPredicted RBP12.05□□□□□ -0.48
PCF11-201ENST00000298281 AFTPHQ6ULP2 937 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 PHC3Q8NDX5 983 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 OR4A15Q8NGL6 344 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 GAL3ST1Q99999 423 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 ATP13A3Q9H7F0 1226 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 TULP3O75386 442 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 ATP6V1G2O95670 118 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 FOXM1Q08050 763 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 PITRM1Q5JRX3 1037 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 ZNF75CPQ92670 426 aaPredicted RBP12.05□□□□□ -0.48
PCF11-201ENST00000298281 CD101Q93033 1021 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 CITED4Q96RK1 184 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 TMEM121BQ9BXQ6 578 aaPredicted RBP12.05□□□□□ -0.48
PCF11-201ENST00000298281 UNC13BO14795 1591 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 A0A0J9YVX5 310 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 M0R036 132 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 LTA4HP09960 611 aaKnown RBP12.05□□□□□ -0.48
PCF11-201ENST00000298281 ADAM8P78325 824 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 TXNL4AP83876 142 aaKnown RBP12.05□□□□□ -0.48
PCF11-201ENST00000298281 HSPA14Q0VDF9 509 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 ST3GAL1Q11201 340 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 DPYSQ14117 519 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 IKBKEQ14164 716 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 FKBP1CQ5VVH2 108 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 HFE2Q6ZVN8 426 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 TSPAN18Q96SJ8 248 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 RTFDC1Q9BY42 306 aaPredicted RBP12.05□□□□□ -0.48
PCF11-201ENST00000298281 LACRTQ9GZZ8 138 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 TMEM134Q9H6X4 195 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 BTBD7Q9P203 1132 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 MRPS33Q9Y291 106 aaKnown RBP12.05□□□□□ -0.48
PCF11-201ENST00000298281 SALL1Q9NSC2 1324 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 M0R129 80 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 CASKO14936 926 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 NT5EP21589 574 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 AP2S1P53680 142 aaPredicted RBP12.05□□□□□ -0.48
PCF11-201ENST00000298281 XIAPP98170 497 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 DNASE1L3Q13609 305 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 PTPN20Q4JDL3 420 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 UBXN11Q5T124 520 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 STXBP5Q5T5C0 1151 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 C9orf131Q5VYM1 1079 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 PTCHD4Q6ZW05 846 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 ETNPPLQ8TBG4 499 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 C11orf24Q96F05 449 aaPredicted RBP12.05□□□□□ -0.48
PCF11-201ENST00000298281 CDRT15Q96T59 188 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 ANKZF1Q9H8Y5 726 aa12.05□□□□□ -0.48
PCF11-201ENST00000298281 DCXO43602 365 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 CSN2P05814 226 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 SLC6A2P23975 617 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 MIPP30301 263 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 TNK2Q07912 1038 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.04□□□□□ -0.48
PCF11-201ENST00000298281 SMIM5Q71RC9 77 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 DNASE1L2Q92874 299 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 TATDN2Q93075 761 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 MTFR1LQ9H019 292 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 MRPS23Q9Y3D9 190 aaKnown RBP12.04□□□□□ -0.48
PCF11-201ENST00000298281 A0A0A0MRY4 1105 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 RGSL1A5PLK6 1076 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 CPSF4LA6NMK7 179 aaKnown RBP12.04□□□□□ -0.48
PCF11-201ENST00000298281 TPH1P17752 444 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 CCNOP22674 350 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 INHBEP58166 350 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 NRF1Q16656 503 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 LRRC38Q5VT99 294 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 ADNP2Q6IQ32 1131 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 SCUBE3Q8IX30 993 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 SPERTQ8NA61 448 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 MYDGFQ969H8 173 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 SPATA13Q96N96 652 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 PCDH18Q9HCL0 1135 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 CACNB4O00305 520 aaPredicted RBP12.04□□□□□ -0.48
PCF11-201ENST00000298281 RGL2O15211 777 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 BCAS1O75363 584 aaPredicted RBP12.04□□□□□ -0.48
PCF11-201ENST00000298281 NUDT17P0C025 328 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 PECAM1P16284 738 aaPredicted RBP12.04□□□□□ -0.48
PCF11-201ENST00000298281 PPIBP23284 216 aaKnown RBP12.04□□□□□ -0.48
PCF11-201ENST00000298281 CDH8P55286 799 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 SELENOVP59797 346 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 TEAD4Q15561 434 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 CYP2R1Q6VVX0 501 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 SNX32Q86XE0 403 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 ZFP14Q9HCL3 533 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 MRPL17Q9NRX2 175 aaKnown RBP12.04□□□□□ -0.48
PCF11-201ENST00000298281 DDX20Q9UHI6 824 aaKnown RBP12.04□□□□□ -0.48
PCF11-201ENST00000298281 LEF1Q9UJU2 399 aaPredicted RBP12.04□□□□□ -0.48
PCF11-201ENST00000298281 ACTL7BQ9Y614 415 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 IQSEC2Q5JU85 1478 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 RHPN2P1A8MT19 583 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 KCNK1O00180 336 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 PDHXO00330 501 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 MAN2A2P49641 1150 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 ALDH5A1P51649 535 aaPredicted RBP12.04□□□□□ -0.48
PCF11-201ENST00000298281 XKR6Q5GH73 641 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 GCNT7Q6ZNI0 430 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 OTUB2Q96DC9 234 aa12.04□□□□□ -0.48
PCF11-201ENST00000298281 PHF12Q96QT6 1004 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms