RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 SLCO1B3Q9NPD5 702 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 TCRBV7S2A1N4TA0A589 114 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 GPR182O15218 404 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 SUV39H1O43463 412 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 ORC5O43913 435 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 UGT1A5P35504 534 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 GRIA4P48058 902 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 LDLRAP1Q5SW96 308 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 RNASEH2BQ5TBB1 312 aaKnown RBP9.86□□□□□ -0.83
COL6A3-201ENST00000295550 TFAP2DQ7Z6R9 452 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 ZNF384Q8TF68 577 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 EXD2Q9NVH0 621 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 FAM50BQ9Y247 325 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 DNM1LO00429 736 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 LGR5O75473 907 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 EGFRP00533 1210 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 IDO1P14902 403 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 PPP2R2BQ00005 443 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 CELF3Q5SZQ8 465 aaKnown RBP9.86□□□□□ -0.83
COL6A3-201ENST00000295550 EFCAB3Q8N7B9 438 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 TPK1Q9H3S4 243 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 DOCK2Q92608 1830 aa9.86□□□□□ -0.83
COL6A3-201ENST00000295550 H3BRB1 525 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 GRB14Q14449 540 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 CARTPTQ16568 116 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 C15orf59Q2T9L4 293 aaPredicted RBP9.85□□□□□ -0.83
COL6A3-201ENST00000295550 FRMD7Q6ZUT3 714 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 TUT1Q9H6E5 874 aaKnown RBP9.85□□□□□ -0.83
COL6A3-201ENST00000295550 CABIN1Q9Y6J0 2220 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 CRHR1P34998 444 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 PHC1P78364 1004 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 PAGE2BQ5JRK9 111 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 DCAF12L1Q5VU92 463 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 IRAK1BP1Q5VVH5 260 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 ADGRD1Q6QNK2 874 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 AKT1S1Q96B36 256 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 ZDHHC18Q9NUE0 388 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 GIN1Q9NXP7 522 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 XPR1Q9UBH6 696 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 ABCG2Q9UNQ0 655 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 CYP4F8P98187 520 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 CNTN2Q02246 1040 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 CAPSQ13938 189 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 SUZ12Q15022 739 aaKnown RBP9.85□□□□□ -0.83
COL6A3-201ENST00000295550 ALG11Q2TAA5 492 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 AAGABQ6PD74 315 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 DRICH1Q6PGQ1 229 aaPredicted RBP9.85□□□□□ -0.83
COL6A3-201ENST00000295550 FAM47BQ8NA70 645 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 SLC17A7Q9P2U7 560 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 ATPIF1Q9UII2 106 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 CNTNAP2Q9UHC6 1331 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 WRBO00258 174 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 NRP2O60462 931 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 UGT2B11O75310 529 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 NCK1P16333 377 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 PTPRAP18433 802 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 TPSB2P20231 275 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 MAZP56270 477 aaKnown RBP9.85□□□□□ -0.83
COL6A3-201ENST00000295550 GALNT3Q14435 633 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 TPSAB1Q15661 275 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 CYP2A13Q16696 494 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 CNSTQ6PJW8 725 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 PLEKHH3Q7Z736 793 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 IFNLR1Q8IU57 520 aaPredicted RBP9.85□□□□□ -0.83
COL6A3-201ENST00000295550 FAM13CQ8NE31 585 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 TBATAQ96M53 351 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 MND1Q9BWT6 205 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 DNAJC28Q9NX36 388 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 SNTG2Q9NY99 539 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 ZNF214Q9UL59 606 aaPredicted RBP9.85□□□□□ -0.83
COL6A3-201ENST00000295550 RAB26Q9ULW5 256 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 SNX6Q9UNH7 406 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 PLOD2O00469 737 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 LYNP07948 512 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 ITGA2BP08514 1039 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 CHRNB2P17787 502 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 CCNCP24863 283 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 AZGP1P25311 298 aaKnown RBP9.85□□□□□ -0.83
COL6A3-201ENST00000295550 ATP13A4Q4VNC1 1196 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 STK40Q8N2I9 435 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 TMEM86AQ8N2M4 240 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 FITM2Q8N6M3 262 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 WNT8BQ93098 351 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 RTKNQ9BST9 563 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 TRIM38O00635 465 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 RHOCP08134 193 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 ZNF12P17014 697 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 BUD31P41223 144 aaPredicted RBP9.85□□□□□ -0.83
COL6A3-201ENST00000295550 LEMD2Q8NC56 503 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 RAET1EQ8TD07 263 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 TRNT1Q96Q11 434 aaKnown RBP9.85□□□□□ -0.83
COL6A3-201ENST00000295550 RBM22Q9NW64 420 aaKnown RBP eCLIP9.85□□□□□ -0.83
COL6A3-201ENST00000295550 GIT1Q9Y2X7 761 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 MYPNQ86TC9 1320 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 PRAMEF33A0A0G2JMD5 474 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 M0R036 132 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 TP73O15350 636 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 PRAMEF10O60809 474 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 RB1P06400 928 aa9.85□□□□□ -0.83
COL6A3-201ENST00000295550 CKMP06732 381 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms