RNA–Protein interactions for RNA: ENST00000292535.11

CUX1-201, Transcript of cut like homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CUX1, Length 13,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-201ENST00000292535 IL1RAPQ9NPH3 570 aa9.32□□□□□ -0.92
CUX1-201ENST00000292535 GULP1Q9UBP9 304 aa9.32□□□□□ -0.92
CUX1-201ENST00000292535 SEC14L3Q9UDX4 400 aa9.32□□□□□ -0.92
CUX1-201ENST00000292535 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.32□□□□□ -0.924e-11■■■■■ 28.6
CUX1-201ENST00000292535 SALL1Q9NSC2 1324 aa9.32□□□□□ -0.92
CUX1-201ENST00000292535 DHRS12A0PJE2 317 aa9.32□□□□□ -0.92
CUX1-201ENST00000292535 TNFRSF8P28908 595 aa9.32□□□□□ -0.92
CUX1-201ENST00000292535 ABL2P42684 1182 aa9.32□□□□□ -0.92
CUX1-201ENST00000292535 LAPTM5Q13571 262 aa9.32□□□□□ -0.92
CUX1-201ENST00000292535 FIBCD1Q8N539 461 aa9.32□□□□□ -0.92
CUX1-201ENST00000292535 RFT1Q96AA3 541 aa9.32□□□□□ -0.92
CUX1-201ENST00000292535 PLGRKTQ9HBL7 147 aa9.32□□□□□ -0.92
CUX1-201ENST00000292535 UPB1Q9UBR1 384 aa9.32□□□□□ -0.92
CUX1-201ENST00000292535 KIAA1210Q9ULL0 1709 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 C5orf60A6NFR6 353 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 TRAFD1O14545 582 aaPredicted RBP9.31□□□□□ -0.92
CUX1-201ENST00000292535 HDAC3O15379 428 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 SH3BGRLO75368 114 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 MNDAP41218 407 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 FAM183BPQ6ZVS7 135 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 PLPPR4Q7Z2D5 763 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 BPIFB6Q8NFQ5 453 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 OR4L1Q8NH43 312 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 DGCR14Q96DF8 476 aaKnown RBP9.31□□□□□ -0.92
CUX1-201ENST00000292535 CMPK1P30085 196 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 SCRN3Q0VDG4 424 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 PARP15Q460N3 678 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 CDYL2Q8N8U2 506 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 CERS2Q96G23 380 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 IL12BP29460 328 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 PTPRNQ16849 979 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 DHDDSQ86SQ9 333 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 C12orf56Q8IXR9 622 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 IPCEF1Q8WWN9 437 aaPredicted RBP9.31□□□□□ -0.92
CUX1-201ENST00000292535 PGM2Q96G03 612 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 ULBP1Q9BZM6 244 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 GGA2Q9UJY4 613 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 PCNX2A6NKB5 2137 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 TSPAN9O75954 239 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 USP50Q70EL3 339 aaPredicted RBP9.31□□□□□ -0.92
CUX1-201ENST00000292535 C17orf64Q86WR6 236 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 HCN1O60741 890 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 CTSKP43235 329 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 PTDSS1P48651 473 aaKnown RBP9.31□□□□□ -0.92
CUX1-201ENST00000292535 PKNOX1P55347 436 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 RNF43Q68DV7 783 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 TDRD1Q9BXT4 1180 aaKnown RBP9.31□□□□□ -0.92
CUX1-201ENST00000292535 PFDN2Q9UHV9 154 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 RBM47A0AV96 593 aaKnown RBP9.31□□□□□ -0.92
CUX1-201ENST00000292535 PSMG1O95456 288 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 GNALP38405 381 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 SPESP1Q6UW49 350 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 FBXW8Q8N3Y1 598 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 NXF3Q9H4D5 531 aaKnown RBP9.31□□□□□ -0.92
CUX1-201ENST00000292535 NCANO14594 1321 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 ALPK2Q86TB3 2170 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 ALPPL2P10696 532 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 ITIH1P19827 911 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 TMEM119Q4V9L6 283 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 NOMO2Q5JPE7 1267 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 BRMS1LQ5PSV4 323 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 CERCAMQ5T4B2 595 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 CYP1A2P05177 515 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 ALDH4A1P30038 563 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 PPP3R1P63098 170 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 LINGO1Q96FE5 620 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 MYO5BQ9ULV0 1848 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 MADDQ8WXG6 1647 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 G3V2T6 193 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 NUAK1O60285 661 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 SCNN1GP51170 649 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 GPR180Q86V85 440 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 PARGQ86W56 976 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 GALNT13Q8IUC8 556 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 FBXO22Q8NEZ5 403 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 RFKQ969G6 155 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 PLEKHG4BQ96PX9 1271 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 ZYG11BQ9C0D3 744 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 MYO7BQ6PIF6 2116 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 ABHD2P08910 425 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 STXBP1P61764 594 aaKnown RBP9.31□□□□□ -0.92
CUX1-201ENST00000292535 DENND5AQ6IQ26 1287 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 OR2L3Q8NG85 312 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 CALML5Q9NZT1 146 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 RAPGEFL1Q9UHV5 662 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 AGO1Q9UL18 857 aaKnown RBP9.31□□□□□ -0.92
CUX1-201ENST00000292535 FADS2P1A8MWK0 482 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 H0YJX3 145 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 SRFBP1Q8NEF9 429 aaKnown RBP9.31□□□□□ -0.92
CUX1-201ENST00000292535 DNAJB14Q8TBM8 379 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 EPS8L1Q8TE68 723 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 RBM18Q96H35 190 aaKnown RBP9.31□□□□□ -0.92
CUX1-201ENST00000292535 RBM4BQ9BQ04 359 aaKnown RBP9.31□□□□□ -0.92
CUX1-201ENST00000292535 RBM4Q9BWF3 364 aaKnown RBP9.31□□□□□ -0.92
CUX1-201ENST00000292535 DMTF1Q9Y222 760 aa9.31□□□□□ -0.92
CUX1-201ENST00000292535 FAM205AQ6ZU69 1335 aa9.3□□□□□ -0.92
CUX1-201ENST00000292535 GNSP15586 552 aa9.3□□□□□ -0.92
CUX1-201ENST00000292535 RPL22P35268 128 aaKnown RBP9.3□□□□□ -0.92
CUX1-201ENST00000292535 XIAPP98170 497 aa9.3□□□□□ -0.92
CUX1-201ENST00000292535 NRF1Q16656 503 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms