RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 OSCP1Q8WVF1 389 aa16.8■□□□□ 0.28
CPSF4-201ENST00000292476 NRG4Q8WWG1 115 aa16.8■□□□□ 0.28
CPSF4-201ENST00000292476 SMARCD2Q92925 531 aa16.8■□□□□ 0.28
CPSF4-201ENST00000292476 FAM136AQ96C01 138 aa16.8■□□□□ 0.28
CPSF4-201ENST00000292476 MFSD3Q96ES6 412 aa16.8■□□□□ 0.28
CPSF4-201ENST00000292476 PANX3Q96QZ0 392 aa16.8■□□□□ 0.28
CPSF4-201ENST00000292476 AGAP2Q99490 1192 aa16.8■□□□□ 0.28
CPSF4-201ENST00000292476 OSBPL1AQ9BXW6 950 aa16.8■□□□□ 0.28
CPSF4-201ENST00000292476 OXSMQ9NWU1 459 aa16.8■□□□□ 0.28
CPSF4-201ENST00000292476 THG1LQ9NWX6 298 aaKnown RBP16.8■□□□□ 0.28
CPSF4-201ENST00000292476 SLC25A13Q9UJS0 675 aa16.8■□□□□ 0.28
CPSF4-201ENST00000292476 RIMKLBQ9ULI2 386 aa16.8■□□□□ 0.28
CPSF4-201ENST00000292476 A0A088AWK7 358 aa16.79■□□□□ 0.28
CPSF4-201ENST00000292476 SLCO1B7G3V0H7 640 aa16.79■□□□□ 0.28
CPSF4-201ENST00000292476 CD160O95971 181 aa16.79■□□□□ 0.28
CPSF4-201ENST00000292476 ADH1CP00326 375 aa16.79■□□□□ 0.28
CPSF4-201ENST00000292476 TYRP14679 529 aa16.79■□□□□ 0.28
CPSF4-201ENST00000292476 ADSLP30566 484 aaPredicted RBP16.79■□□□□ 0.28
CPSF4-201ENST00000292476 ARRB2P32121 409 aa16.79■□□□□ 0.28
CPSF4-201ENST00000292476 ASPHQ12797 758 aa16.79■□□□□ 0.28
CPSF4-201ENST00000292476 PITRM1Q5JRX3 1037 aa16.79■□□□□ 0.28
CPSF4-201ENST00000292476 CFAP157Q5JU67 520 aa16.79■□□□□ 0.28
CPSF4-201ENST00000292476 SIRPB2Q5JXA9 342 aa16.79■□□□□ 0.28
CPSF4-201ENST00000292476 C1orf146Q5VVC0 180 aa16.79■□□□□ 0.28
CPSF4-201ENST00000292476 KIAA0930Q6ICG6 404 aaPredicted RBP16.79■□□□□ 0.28
CPSF4-201ENST00000292476 LINGO4Q6UY18 593 aa16.79■□□□□ 0.28
CPSF4-201ENST00000292476 ZC3HC1Q86WB0 502 aaKnown RBP16.79■□□□□ 0.28
CPSF4-201ENST00000292476 APCDD1Q8J025 514 aa16.79■□□□□ 0.28
CPSF4-201ENST00000292476 PLD6Q8N2A8 252 aaKnown RBP16.79■□□□□ 0.28
CPSF4-201ENST00000292476 WFDC5Q8TCV5 224 aa16.79■□□□□ 0.28
CPSF4-201ENST00000292476 CALML6Q8TD86 181 aa16.79■□□□□ 0.28
CPSF4-201ENST00000292476 BPIFB1Q8TDL5 484 aa16.79■□□□□ 0.28
CPSF4-201ENST00000292476 SCG3Q8WXD2 468 aaKnown RBP16.79■□□□□ 0.28
CPSF4-201ENST00000292476 ISG20Q96AZ6 181 aaKnown RBP16.79■□□□□ 0.28
CPSF4-201ENST00000292476 TRPV4Q9HBA0 871 aa16.79■□□□□ 0.28
CPSF4-201ENST00000292476 DUS2Q9NX74 493 aaKnown RBP16.79■□□□□ 0.28
CPSF4-201ENST00000292476 IL1RAPL1Q9NZN1 696 aa16.79■□□□□ 0.28
CPSF4-201ENST00000292476 TLK1Q9UKI8 766 aa16.79■□□□□ 0.28
CPSF4-201ENST00000292476 CRTAMO95727 393 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 ATXN1LP0C7T5 689 aaKnown RBP16.78■□□□□ 0.28
CPSF4-201ENST00000292476 ANPEPP15144 967 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 SESN3P58005 492 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 SEPT6Q14141 434 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 GSTA3Q16772 222 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 LY6G5CQ5SRR4 150 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 LIPMQ5VYY2 423 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 TRIM68Q6AZZ1 485 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 CES5AQ6NT32 575 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 PGM2L1Q6PCE3 622 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 NCEH1Q6PIU2 408 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 NPAS3Q8IXF0 933 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 BRSK1Q8TDC3 778 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 CNDP1Q96KN2 507 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 LMLNQ96KR4 655 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 ASB16Q96NS5 453 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 ZNF184Q99676 751 aaPredicted RBP16.78■□□□□ 0.28
CPSF4-201ENST00000292476 FAM167BQ9BTA0 163 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 C1QTNF1Q9BXJ1 281 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 TDRD1Q9BXT4 1180 aaKnown RBP16.78■□□□□ 0.28
CPSF4-201ENST00000292476 CEP44Q9C0F1 390 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 DRC3Q9H069 523 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 ILKAPQ9H0C8 392 aaPredicted RBP16.78■□□□□ 0.28
CPSF4-201ENST00000292476 IARS2Q9NSE4 1012 aaKnown RBP16.78■□□□□ 0.28
CPSF4-201ENST00000292476 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.78■□□□□ 0.28
CPSF4-201ENST00000292476 LHX3Q9UBR4 397 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 VTI1BQ9UEU0 232 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 RAP2CQ9Y3L5 183 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 C2orf16Q68DN1 1984 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 NOTCH4Q99466 2003 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 DLL1O00548 723 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 NFATC1O95644 943 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 IGSF6O95976 241 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 PABPC1P11940 636 aaKnown RBP16.78■□□□□ 0.28
CPSF4-201ENST00000292476 NMBRP28336 390 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 CD70P32970 193 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 CHRNA4P43681 627 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 RPL26P61254 145 aaKnown RBP16.78■□□□□ 0.28
CPSF4-201ENST00000292476 ATAT1Q5SQI0 421 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 TSTD2Q5T7W7 516 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 AHI1Q8N157 1196 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 SUSD6Q92537 303 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 FGF13Q92913 245 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 RMDN1Q96DB5 314 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 LINC00597Q9H2U6 94 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 COG4Q9H9E3 785 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 TREX1Q9NSU2 369 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 ZNF358Q9NW07 568 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 NDE1Q9NXR1 346 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 HACD3Q9P035 362 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 HS3ST2Q9Y278 367 aa16.78■□□□□ 0.28
CPSF4-201ENST00000292476 SP100P23497 879 aaPredicted RBP16.77■□□□□ 0.28
CPSF4-201ENST00000292476 HLA-FP30511 346 aa16.77■□□□□ 0.28
CPSF4-201ENST00000292476 NNMTP40261 264 aa16.77■□□□□ 0.28
CPSF4-201ENST00000292476 KPNA2P52292 529 aaKnown RBP16.77■□□□□ 0.28
CPSF4-201ENST00000292476 SNRPD1P62314 119 aaKnown RBP16.77■□□□□ 0.28
CPSF4-201ENST00000292476 GRM3Q14832 879 aa16.77■□□□□ 0.28
CPSF4-201ENST00000292476 CAPRIN2Q6IMN6 1127 aaKnown RBP16.77■□□□□ 0.28
CPSF4-201ENST00000292476 ATG14Q6ZNE5 492 aa16.77■□□□□ 0.28
CPSF4-201ENST00000292476 RIN3Q8TB24 985 aa16.77■□□□□ 0.28
CPSF4-201ENST00000292476 WFIKKN2Q8TEU8 576 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms