RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 ARMCX1Q9P291 453 aa10.15□□□□□ -0.78
C9orf43-201ENST00000288462 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.15□□□□□ -0.78
C9orf43-201ENST00000288462 PKP3Q9Y446 797 aa10.15□□□□□ -0.78
C9orf43-201ENST00000288462 OAS3Q9Y6K5 1087 aaKnown RBP10.15□□□□□ -0.78
C9orf43-201ENST00000288462 UBA6A0AVT1 1052 aaPredicted RBP10.15□□□□□ -0.79
C9orf43-201ENST00000288462 NEMP2A6NFY4 417 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 NEDD8-MDP1E9PL57 170 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 NDUFS3O75489 264 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 IPO13O94829 963 aaKnown RBP10.15□□□□□ -0.79
C9orf43-201ENST00000288462 PABPC1P11940 636 aaKnown RBP10.15□□□□□ -0.79
C9orf43-201ENST00000288462 BMP1P13497 986 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 CTPS1P17812 591 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 SERPINA4P29622 427 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 CCR10P46092 362 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 CDKN1CP49918 316 aaPredicted RBP10.15□□□□□ -0.79
C9orf43-201ENST00000288462 RPL14P50914 215 aaKnown RBP10.15□□□□□ -0.79
C9orf43-201ENST00000288462 ADARP55265 1226 aaKnown RBP10.15□□□□□ -0.79
C9orf43-201ENST00000288462 SNRPD1P62314 119 aaKnown RBP10.15□□□□□ -0.79
C9orf43-201ENST00000288462 DMC1Q14565 340 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 ELMSAN1Q6PJG2 1045 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 TRIM67Q6ZTA4 783 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 GRASPQ7Z6J2 395 aaPredicted RBP10.15□□□□□ -0.79
C9orf43-201ENST00000288462 KIAA0907Q7Z7F0 614 aaPredicted RBP10.15□□□□□ -0.79
C9orf43-201ENST00000288462 SLC22A9Q8IVM8 553 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 PCDH20Q8N6Y1 951 aaKnown RBP10.15□□□□□ -0.79
C9orf43-201ENST00000288462 GRIN3AQ8TCU5 1115 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 MAPK15Q8TD08 544 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 PTERQ96BW5 349 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 ECHDC3Q96DC8 303 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 MOCOSQ96EN8 888 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 SGF29Q96ES7 293 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 ZSWIM3Q96MP5 696 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 LYSMD1Q96S90 227 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 BBS2Q9BXC9 721 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 GPR63Q9BZJ6 419 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 BPIFA1Q9NP55 256 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 KLC4Q9NSK0 619 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 NCKIPSDQ9NZQ3 722 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 DPP7Q9UHL4 492 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 SLC25A13Q9UJS0 675 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 APOBEC2Q9Y235 224 aaKnown RBP10.15□□□□□ -0.79
C9orf43-201ENST00000288462 HCFC2Q9Y5Z7 792 aa10.15□□□□□ -0.79
C9orf43-201ENST00000288462 A0A0U1RQS6 177 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 F8W8V4 182 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 GAPDHSO14556 408 aaPredicted RBP10.14□□□□□ -0.79
C9orf43-201ENST00000288462 ZNF197O14709 1029 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 PFDN6O15212 129 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 HDAC3O15379 428 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 ZBTB14O43829 449 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 SRP72O76094 671 aaKnown RBP10.14□□□□□ -0.79
C9orf43-201ENST00000288462 CA3P07451 260 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 TYRP14679 529 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 AOC1P19801 751 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 GKP32189 559 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 ALDH18A1P54886 795 aaKnown RBP10.14□□□□□ -0.79
C9orf43-201ENST00000288462 ERVK-21P61565 698 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 CACNG1Q06432 222 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 PDAP1Q13442 181 aaKnown RBP10.14□□□□□ -0.79
C9orf43-201ENST00000288462 RIPK1Q13546 671 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 CTSL3PQ5NE16 218 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 VWA5B1Q5TIE3 1220 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 FAM109BQ6ICB4 259 aaPredicted RBP10.14□□□□□ -0.79
C9orf43-201ENST00000288462 ZSWIM9Q86XI8 627 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 KIAA1958Q8N8K9 716 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 RHEBL1Q8TAI7 183 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 L3HYPDHQ96EM0 354 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 CNDP1Q96KN2 507 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 RPL10LQ96L21 214 aaKnown RBP10.14□□□□□ -0.79
C9orf43-201ENST00000288462 MIPEPQ99797 713 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 LBHD1Q9BQE6 289 aaPredicted RBP10.14□□□□□ -0.79
C9orf43-201ENST00000288462 TBC1D10AQ9BXI6 508 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 ALG9Q9H6U8 611 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 COG4Q9H9E3 785 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 ACSS2Q9NR19 701 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 TAS2R13Q9NYV9 303 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 COMMD10Q9Y6G5 202 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 PLXNB3Q9ULL4 1909 aa10.14□□□□□ -0.79
C9orf43-201ENST00000288462 COL4A3Q01955 1670 aa10.13□□□□□ -0.79
C9orf43-201ENST00000288462 GRXCR1A8MXD5 290 aa10.13□□□□□ -0.79
C9orf43-201ENST00000288462 SLCO1B7G3V0H7 640 aa10.13□□□□□ -0.79
C9orf43-201ENST00000288462 H3BMM5 538 aa10.13□□□□□ -0.79
C9orf43-201ENST00000288462 GRID2O43424 1007 aa10.13□□□□□ -0.79
C9orf43-201ENST00000288462 RHOBTB1O94844 696 aa10.13□□□□□ -0.79
C9orf43-201ENST00000288462 PKMP14618 531 aaKnown RBP10.13□□□□□ -0.79
C9orf43-201ENST00000288462 SP100P23497 879 aaPredicted RBP10.13□□□□□ -0.79
C9orf43-201ENST00000288462 WEE1P30291 646 aa10.13□□□□□ -0.79
C9orf43-201ENST00000288462 FMO4P31512 558 aa10.13□□□□□ -0.79
C9orf43-201ENST00000288462 HNRNPH1P31943 449 aaKnown RBP10.13□□□□□ -0.79
C9orf43-201ENST00000288462 SULT2A1Q06520 285 aa10.13□□□□□ -0.79
C9orf43-201ENST00000288462 UBAP2LQ14157 1087 aaKnown RBP10.13□□□□□ -0.79
C9orf43-201ENST00000288462 PTPRNQ16849 979 aa10.13□□□□□ -0.79
C9orf43-201ENST00000288462 MYLK3Q32MK0 819 aa10.13□□□□□ -0.79
C9orf43-201ENST00000288462 SLC9B1Q4ZJI4 515 aa10.13□□□□□ -0.79
C9orf43-201ENST00000288462 ZRANB3Q5FWF4 1079 aa10.13□□□□□ -0.79
C9orf43-201ENST00000288462 CFAP157Q5JU67 520 aa10.13□□□□□ -0.79
C9orf43-201ENST00000288462 LY6G5CQ5SRR4 150 aa10.13□□□□□ -0.79
C9orf43-201ENST00000288462 ZNF697Q5TEC3 545 aa10.13□□□□□ -0.79
C9orf43-201ENST00000288462 SEL1L3Q68CR1 1132 aa10.13□□□□□ -0.79
C9orf43-201ENST00000288462 FRMD7Q6ZUT3 714 aa10.13□□□□□ -0.79
C9orf43-201ENST00000288462 ADIPOR2Q86V24 386 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms