RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 SPATA13Q96N96 652 aa25.06■■□□□ 1.6
PDF-201ENST00000288022 SRPK1Q96SB4 655 aaKnown RBP25.06■■□□□ 1.6
PDF-201ENST00000288022 CARD9Q9H257 536 aa25.06■■□□□ 1.6
PDF-201ENST00000288022 USP29Q9HBJ7 922 aa25.06■■□□□ 1.6
PDF-201ENST00000288022 FGF22Q9HCT0 170 aa25.06■■□□□ 1.6
PDF-201ENST00000288022 MRPL40Q9NQ50 206 aaKnown RBP25.06■■□□□ 1.6
PDF-201ENST00000288022 DOLKQ9UPQ8 538 aa25.06■■□□□ 1.6
PDF-201ENST00000288022 LOC285095A0A1B0GVY8 99 aa25.05■■□□□ 1.6
PDF-201ENST00000288022 EPOP01588 193 aa25.05■■□□□ 1.6
PDF-201ENST00000288022 PYGLP06737 847 aa25.05■■□□□ 1.6
PDF-201ENST00000288022 ANXA6P08133 673 aa25.05■■□□□ 1.6
PDF-201ENST00000288022 PSMB4P28070 264 aa25.05■■□□□ 1.6
PDF-201ENST00000288022 TEAD1P28347 426 aa25.05■■□□□ 1.6
PDF-201ENST00000288022 ELOCQ15369 112 aa25.05■■□□□ 1.6
PDF-201ENST00000288022 PROX2Q3B8N5 592 aa25.05■■□□□ 1.6
PDF-201ENST00000288022 SIRPB2Q5JXA9 342 aa25.05■■□□□ 1.6
PDF-201ENST00000288022 KCTD16Q68DU8 428 aa25.05■■□□□ 1.6
PDF-201ENST00000288022 SLC13A5Q86YT5 568 aaPredicted RBP25.05■■□□□ 1.6
PDF-201ENST00000288022 FAM71DQ8N9W8 422 aa25.05■■□□□ 1.6
PDF-201ENST00000288022 FAM83DQ9H4H8 585 aa25.05■■□□□ 1.6
PDF-201ENST00000288022 SUDS3Q9H7L9 328 aaPredicted RBP25.05■■□□□ 1.6
PDF-201ENST00000288022 CYP4F12Q9HCS2 524 aa25.05■■□□□ 1.6
PDF-201ENST00000288022 LRP4O75096 1905 aa25.04■■□□□ 1.6
PDF-201ENST00000288022 TNFRSF10CO14798 259 aa25.04■■□□□ 1.6
PDF-201ENST00000288022 CHRNA4P43681 627 aa25.04■■□□□ 1.6
PDF-201ENST00000288022 DOK6Q6PKX4 331 aa25.04■■□□□ 1.6
PDF-201ENST00000288022 ADAMTSL4Q6UY14 1074 aa25.04■■□□□ 1.6
PDF-201ENST00000288022 ARHGEF18Q6ZSZ5 1173 aa25.04■■□□□ 1.6
PDF-201ENST00000288022 RAB44Q7Z6P3 723 aaPredicted RBP25.04■■□□□ 1.6
PDF-201ENST00000288022 SLC35B2Q8TB61 432 aa25.04■■□□□ 1.6
PDF-201ENST00000288022 ATG4AQ8WYN0 398 aa25.04■■□□□ 1.6
PDF-201ENST00000288022 APOLD1Q96LR9 279 aa25.04■■□□□ 1.6
PDF-201ENST00000288022 AGAP2Q99490 1192 aa25.04■■□□□ 1.6
PDF-201ENST00000288022 TMEM121Q9BTD3 319 aa25.04■■□□□ 1.6
PDF-201ENST00000288022 FICDQ9BVA6 458 aa25.04■■□□□ 1.6
PDF-201ENST00000288022 SCNM1Q9BWG6 230 aa25.04■■□□□ 1.6
PDF-201ENST00000288022 CLPBQ9H078 707 aa25.04■■□□□ 1.6
PDF-201ENST00000288022 AAR2Q9Y312 384 aaKnown RBP25.04■■□□□ 1.6
PDF-201ENST00000288022 SPO11Q9Y5K1 396 aa25.04■■□□□ 1.6
PDF-201ENST00000288022 DGKBQ9Y6T7 804 aa25.04■■□□□ 1.6
PDF-201ENST00000288022 PRSS38A1L453 326 aa25.03■■□□□ 1.6
PDF-201ENST00000288022 RGSL1A5PLK6 1076 aa25.03■■□□□ 1.6
PDF-201ENST00000288022 LMO7DNF2Z398 122 aa25.03■■□□□ 1.6
PDF-201ENST00000288022 INPP4BO15327 924 aa25.03■■□□□ 1.6
PDF-201ENST00000288022 RFPL3O75679 317 aa25.03■■□□□ 1.6
PDF-201ENST00000288022 SOD1P00441 154 aa25.03■■□□□ 1.6
PDF-201ENST00000288022 CELA2BP08218 269 aaPredicted RBP25.03■■□□□ 1.6
PDF-201ENST00000288022 HLA-DPA1P20036 260 aa25.03■■□□□ 1.6
PDF-201ENST00000288022 ACADVLP49748 655 aa25.03■■□□□ 1.6
PDF-201ENST00000288022 SHC2P98077 582 aa25.03■■□□□ 1.6
PDF-201ENST00000288022 SLC1A5Q15758 541 aa25.03■■□□□ 1.6
PDF-201ENST00000288022 ALS2CLQ60I27 953 aa25.03■■□□□ 1.6
PDF-201ENST00000288022 ZCCHC8Q6NZY4 707 aaKnown RBP25.03■■□□□ 1.6
PDF-201ENST00000288022 NLRP8Q86W28 1048 aa25.03■■□□□ 1.6
PDF-201ENST00000288022 GORASP1Q9BQQ3 440 aa25.03■■□□□ 1.6
PDF-201ENST00000288022 KCNF1Q9H3M0 494 aa25.03■■□□□ 1.6
PDF-201ENST00000288022 EVA1BQ9NVM1 165 aa25.03■■□□□ 1.6
PDF-201ENST00000288022 C5orf60A6NFR6 353 aa25.02■■□□□ 1.6
PDF-201ENST00000288022 TPP1O14773 563 aa25.02■■□□□ 1.6
PDF-201ENST00000288022 YY2O15391 372 aa25.02■■□□□ 1.6
PDF-201ENST00000288022 ZSCAN12O43309 604 aa25.02■■□□□ 1.6
PDF-201ENST00000288022 AGTP01019 485 aa25.02■■□□□ 1.6
PDF-201ENST00000288022 MYF5P13349 255 aa25.02■■□□□ 1.6
PDF-201ENST00000288022 DHRS13Q6UX07 377 aa25.02■■□□□ 1.6
PDF-201ENST00000288022 TMC3Q7Z5M5 1100 aa25.02■■□□□ 1.6
PDF-201ENST00000288022 TRIM74Q86UV6 250 aa25.02■■□□□ 1.6
PDF-201ENST00000288022 GKN2Q86XP6 184 aa25.02■■□□□ 1.6
PDF-201ENST00000288022 BLOC1S5Q8TDH9 187 aa25.02■■□□□ 1.6
PDF-201ENST00000288022 SCG3Q8WXD2 468 aaKnown RBP25.02■■□□□ 1.6
PDF-201ENST00000288022 EID2BQ96D98 161 aa25.02■■□□□ 1.6
PDF-201ENST00000288022 HIC2Q96JB3 615 aa25.02■■□□□ 1.6
PDF-201ENST00000288022 PPP1R2P1Q96PQ5 205 aa25.02■■□□□ 1.6
PDF-201ENST00000288022 TLR10Q9BXR5 811 aa25.02■■□□□ 1.6
PDF-201ENST00000288022 FRMD8Q9BZ67 464 aaPredicted RBP25.02■■□□□ 1.6
PDF-201ENST00000288022 CARS2Q9HA77 564 aaKnown RBP25.02■■□□□ 1.6
PDF-201ENST00000288022 RAD18Q9NS91 495 aa25.02■■□□□ 1.6
PDF-201ENST00000288022 KLK13Q9UKR3 277 aa25.02■■□□□ 1.6
PDF-201ENST00000288022 WASF3Q9UPY6 502 aa25.02■■□□□ 1.6
PDF-201ENST00000288022 PCDHGA1Q9Y5H4 931 aa25.02■■□□□ 1.6
PDF-201ENST00000288022 NCOR2Q9Y618 2525 aa25.01■■□□□ 1.59
PDF-201ENST00000288022 DKK1O94907 266 aa25.01■■□□□ 1.59
PDF-201ENST00000288022 FGF1P05230 155 aa25.01■■□□□ 1.59
PDF-201ENST00000288022 CEACAM5P06731 702 aa25.01■■□□□ 1.59
PDF-201ENST00000288022 POLD2P49005 469 aa25.01■■□□□ 1.59
PDF-201ENST00000288022 HENMT1Q5T8I9 393 aaKnown RBP25.01■■□□□ 1.59
PDF-201ENST00000288022 FAM181AQ8N9Y4 354 aa25.01■■□□□ 1.59
PDF-201ENST00000288022 C1orf54Q8WWF1 131 aa25.01■■□□□ 1.59
PDF-201ENST00000288022 WDR24Q96S15 920 aa25.01■■□□□ 1.59
PDF-201ENST00000288022 SPATA16Q9BXB7 569 aa25.01■■□□□ 1.59
PDF-201ENST00000288022 FRMD8P1Q9BZ68 369 aaPredicted RBP25.01■■□□□ 1.59
PDF-201ENST00000288022 TMEM98Q9Y2Y6 226 aa25.01■■□□□ 1.59
PDF-201ENST00000288022 AURKAO14965 403 aa25■■□□□ 1.59
PDF-201ENST00000288022 LIASO43766 372 aa25■■□□□ 1.59
PDF-201ENST00000288022 CKMT1AP12532 417 aa25■■□□□ 1.59
PDF-201ENST00000288022 ACP1P24666 158 aa25■■□□□ 1.59
PDF-201ENST00000288022 GNPDA1P46926 289 aa25■■□□□ 1.59
PDF-201ENST00000288022 DUSP3P51452 185 aaPredicted RBP25■■□□□ 1.59
PDF-201ENST00000288022 GDF10P55107 478 aa25■■□□□ 1.59
PDF-201ENST00000288022 SNX1Q13596 522 aa25■■□□□ 1.59
PDF-201ENST00000288022 TAF8Q7Z7C8 310 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms