RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 HSD17B2P37059 387 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 PRIM2P49643 509 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 CD83Q01151 205 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 BNC1Q01954 994 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 BTN1A1Q13410 526 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 NFIL3Q16649 462 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 ALFQ53S48 1182 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 CACHD1Q5VU97 1274 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 ZNF772Q68DY9 489 aaPredicted RBP9.21□□□□□ -0.94
PDGFC-201ENST00000274071 LIPIQ6XZB0 460 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 SPOCD1Q6ZMY3 1216 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 USP17L1Q7RTZ2 530 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 TLK2Q86UE8 772 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 SLC44A5Q8NCS7 719 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 HDAC10Q969S8 669 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 ACSF2Q96CM8 615 aaPredicted RBP9.21□□□□□ -0.94
PDGFC-201ENST00000274071 BBS2Q9BXC9 721 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 PPA2Q9H2U2 334 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 IFT46Q9NQC8 304 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 CHRAC1Q9NRG0 131 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 TBC1D13Q9NVG8 400 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 ZC3H7BQ9UGR2 993 aaKnown RBP9.21□□□□□ -0.94
PDGFC-201ENST00000274071 TLK1Q9UKI8 766 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 GRIP1Q9Y3R0 1128 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 KLF2Q9Y5W3 355 aaPredicted RBP9.21□□□□□ -0.94
PDGFC-201ENST00000274071 AUP1Q9Y679 476 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 STON1Q9Y6Q2 735 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 hCG_1818297A0A087WSY0 165 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 TRDMT1O14717 391 aaKnown RBP9.21□□□□□ -0.94
PDGFC-201ENST00000274071 KATNA1O75449 491 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 KRT1P04264 644 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 LRPAP1P30533 357 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 HMGCLP35914 325 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 BAATQ14032 418 aaPredicted RBP9.21□□□□□ -0.94
PDGFC-201ENST00000274071 DPYSL3Q14195 570 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 KCNJ11Q14654 390 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 UGP2Q16851 508 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 LRRC26Q2I0M4 334 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 ZBTB37Q5TC79 503 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 TRMT10BQ6PF06 316 aaKnown RBP9.21□□□□□ -0.94
PDGFC-201ENST00000274071 TIFABQ6ZNK6 161 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 PRSS48Q7RTY5 328 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 EFL1Q7Z2Z2 1120 aaKnown RBP9.21□□□□□ -0.94
PDGFC-201ENST00000274071 TBC1D21Q8IYX1 336 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 RSAD2Q8WXG1 361 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 SHC3Q92529 594 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 CIDECQ96AQ7 238 aaPredicted RBP9.21□□□□□ -0.94
PDGFC-201ENST00000274071 LGALS12Q96DT0 336 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 SLC45A3Q96JT2 553 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 B3GALT6Q96L58 329 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 TEKT5Q96M29 485 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 SMOC2Q9H3U7 446 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 PAK1IP1Q9NWT1 392 aaPredicted RBP9.21□□□□□ -0.94
PDGFC-201ENST00000274071 EHD3Q9NZN3 535 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 BTBD3Q9Y2F9 522 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 A0A1W2PRG6 482 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 DHRS12A0PJE2 317 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 RGS5O15539 181 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 ALDOAP04075 364 aaKnown RBP9.2□□□□□ -0.94
PDGFC-201ENST00000274071 PROS1P07225 676 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 MMP10P09238 476 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 TRAPPC2P0DI81 140 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 TRAPPC2BP0DI82 140 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 NPR1P16066 1061 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 NPR3P17342 541 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 IL10P22301 178 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 FSHRP23945 695 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 EMX1Q04741 257 aaPredicted RBP9.2□□□□□ -0.94
PDGFC-201ENST00000274071 SCRN3Q0VDG4 424 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 PSMD5Q16401 504 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 ZNF404Q494X3 552 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 PITRM1Q5JRX3 1037 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 TBPL2Q6SJ96 375 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 DBX2Q6ZNG2 339 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 CFAP77Q6ZQR2 320 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 LIX1LQ8IVB5 337 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 ARRDC4Q8NCT1 418 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 ACTL9Q8TC94 416 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 NSUN6Q8TEA1 469 aaKnown RBP9.2□□□□□ -0.94
PDGFC-201ENST00000274071 MOCOSQ96EN8 888 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 MMP27Q9H306 513 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 SPAG4Q9NPE6 437 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 HPS4Q9NQG7 708 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 AGPAT3Q9NRZ7 376 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 ZNF224Q9NZL3 707 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 EMC3Q9P0I2 261 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 SLC23A1Q9UHI7 598 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 PDE10AQ9Y233 779 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 COPG1Q9Y678 874 aaKnown RBP9.2□□□□□ -0.94
PDGFC-201ENST00000274071 HSPE1-MOB4S4R3N1 261 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 NRCAMQ92823 1304 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 CDK5RAP2Q96SN8 1893 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 TCP10L2B9ZVM9 353 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 PTGES3LE9PB15 166 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 GLRA3O75311 464 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 OR2B3O76000 313 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 TGM2P21980 687 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 ACVR2AP27037 513 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 GMPRP36959 345 aa9.2□□□□□ -0.94
PDGFC-201ENST00000274071 DYNLT1P63172 113 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms