RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 FNDC3AQ9Y2H6 1198 aaKnown RBP12.9□□□□□ -0.34
COL8A1-202ENST00000273342 A0A087X1B8 175 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 KDM1AO60341 852 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 ATP6V0D1P61421 351 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 ARL13BQ3SXY8 428 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 R3HCC1LQ7Z5L2 792 aaKnown RBP12.89□□□□□ -0.35
COL8A1-202ENST00000273342 C2CD4AQ8NCU7 369 aaPredicted RBP12.89□□□□□ -0.35
COL8A1-202ENST00000273342 ITCHQ96J02 903 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 FAR2Q96K12 515 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 TNIP3Q96KP6 325 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 CCDC138Q96M89 665 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 ZFP42Q96MM3 310 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 NANOGQ9H9S0 305 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 SMURF2Q9HAU4 748 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 ACTR3BQ9P1U1 418 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 MARCH4Q9P2E8 410 aaPredicted RBP12.89□□□□□ -0.35
COL8A1-202ENST00000273342 ANAPC2Q9UJX6 822 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 MYBPHLA2RUH7 354 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 CDK14O94921 469 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 HLA-DQB2P05538 268 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 AXLP30530 894 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 RFC2P35250 354 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 KPNA2P52292 529 aaKnown RBP12.89□□□□□ -0.35
COL8A1-202ENST00000273342 POU4F1Q01851 419 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 TTLL4Q14679 1199 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 MEP1AQ16819 746 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 AAK1Q2M2I8 961 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 ZNF678Q5SXM1 525 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 ZNF362Q5T0B9 420 aaPredicted RBP12.89□□□□□ -0.35
COL8A1-202ENST00000273342 C6orf183Q5T699 404 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 NT5C3BQ969T7 300 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 SDCCAG3Q96C92 435 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 ACOX2Q99424 681 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 CORO1BQ9BR76 489 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 TUBB1Q9H4B7 451 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 RMI1Q9H9A7 625 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 ERGIC3Q9Y282 383 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 WDR37Q9Y2I8 494 aa12.89□□□□□ -0.35
COL8A1-202ENST00000273342 AQP12BA6NM10 295 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 H3BRB1 525 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 NCAM2O15394 837 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 MSI1O43347 362 aaKnown RBP12.88□□□□□ -0.35
COL8A1-202ENST00000273342 SNAP91O60641 907 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 SULT1C4O75897 302 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 DDNO94850 711 aaPredicted RBP12.88□□□□□ -0.35
COL8A1-202ENST00000273342 STAU1O95793 577 aaKnown RBP12.88□□□□□ -0.35
COL8A1-202ENST00000273342 JAK1P23458 1154 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 TAF6P49848 677 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 ARSDP51689 593 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 DNAJB13P59910 316 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 PAN2Q504Q3 1202 aaKnown RBP12.88□□□□□ -0.35
COL8A1-202ENST00000273342 CCNYL2Q5T2Q4 361 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 C8orf82Q6P1X6 216 aaPredicted RBP12.88□□□□□ -0.35
COL8A1-202ENST00000273342 PRR23BQ6ZRT6 265 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 AQP12AQ8IXF9 295 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 ZNF420Q8TAQ5 688 aaPredicted RBP12.88□□□□□ -0.35
COL8A1-202ENST00000273342 CHPT1Q8WUD6 406 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 BIRC7Q96CA5 298 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 KLHL5Q96PQ7 755 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 ADAMTS10Q9H324 1103 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 GLOD4Q9HC38 313 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 AAR2Q9Y312 384 aaKnown RBP12.88□□□□□ -0.35
COL8A1-202ENST00000273342 VWA7Q9Y334 891 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 CLPXO76031 633 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 PRSS56P0CW18 603 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 IMPDH1P20839 514 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 AGXTP21549 392 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 FSHRP23945 695 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 PRDX3P30048 256 aaKnown RBP12.88□□□□□ -0.35
COL8A1-202ENST00000273342 RCVRNP35243 200 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 ADCYAP1R1P41586 468 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 PLA2G16P53816 162 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 OR4D2P58180 307 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 LILRA4P59901 499 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 UFM1P61960 85 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 SEMA3BQ13214 749 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 AQP6Q13520 282 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 PSMD5Q16401 504 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 ISCA2Q86U28 154 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 ANKRD13AQ8IZ07 590 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 ABI1Q8IZP0 508 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 CLYBLQ8N0X4 340 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 LRRC52Q8N7C0 313 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 ABHD11Q8NFV4 315 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 ZUFSPQ96AP4 578 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 ROPN1LQ96C74 230 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 DUS3LQ96G46 650 aaKnown RBP12.88□□□□□ -0.35
COL8A1-202ENST00000273342 PPM1MQ96MI6 270 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 KLHL25Q9H0H3 589 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 RAD21L1Q9H4I0 556 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 CPA4Q9UI42 421 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 ZNF112Q9UJU3 913 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 TRIM64CA6NLI5 447 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 RBP1P09455 135 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 PAMP19021 973 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 MAGP20916 626 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 PRKACGP22612 351 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 NFKBIAP25963 317 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 MTPNP58546 118 aa12.88□□□□□ -0.35
COL8A1-202ENST00000273342 DAOAP59103 153 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms