RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 KPNA3O00505 521 aaPredicted RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 PAPSS2O95340 614 aaPredicted RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 KLRC2P26717 231 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 MRPS6P82932 125 aaKnown RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 PGAM4Q8N0Y7 254 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 CPSF7Q8N684 471 aaKnown RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 TOR3AQ9H497 397 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 MKLN1Q9UL63 735 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 SLC27A6Q9Y2P4 619 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 MEMO1Q9Y316 297 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 PRKAB1Q9Y478 270 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 N6AMT1Q9Y5N5 214 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 RFXANKO14593 260 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 GPIP06744 558 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 GTF2BQ00403 316 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 SWI5Q1ZZU3 235 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 ALYREFQ86V81 257 aaKnown RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 ATCAYQ86WG3 371 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 DAW1Q8N136 415 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 PRELID2Q8N945 189 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 TMCO6Q96DC7 493 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 MTMR9Q96QG7 549 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 ELL3Q9HB65 397 aaPredicted RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 CCDC177Q9NQR7 707 aaPredicted RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 MGAT4AQ9UM21 535 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 PDCD5O14737 125 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 TM7SF2O76062 418 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 POLR2JP52435 117 aaKnown RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 SLC7A2P52569 658 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 IL18Q14116 193 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 CAPN13Q6MZZ7 669 aaPredicted RBP7.97□□□□□ -1.13
LIMD1-201ENST00000273317 PTF1AQ7RTS3 328 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 C10orf107Q8IVU9 208 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 GRIN3AQ8TCU5 1115 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 RAB2BQ8WUD1 216 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 CXorf40BQ96DE9 158 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 PCDH12Q9NPG4 1184 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 STARD7Q9NQZ5 370 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 ASAH2Q9NR71 780 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 CDH22Q9UJ99 828 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 KCNE2Q9Y6J6 123 aa7.97□□□□□ -1.13
LIMD1-201ENST00000273317 NRCAMQ92823 1304 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 KRT33AO76009 404 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 APOC1P02654 83 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 WEE1P30291 646 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 LAPTM5Q13571 262 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 RNASE12Q5GAN4 147 aaKnown RBP7.96□□□□□ -1.13
LIMD1-201ENST00000273317 KLHL35Q6PF15 583 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 GPR180Q86V85 440 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 TOP6BLQ8N6T0 577 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 ADAM32Q8TC27 787 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 RNF157Q96PX1 679 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 FADS3Q9Y5Q0 445 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 MON2Q7Z3U7 1717 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 SHPRHQ149N8 1683 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 FFAR3O14843 346 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 SLC30A4O14863 429 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 CASKO14936 926 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 GPR42O15529 346 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 LINC00032P0C843 101 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 CYP4B1P13584 511 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 GRSF1Q12849 480 aaKnown RBP eCLIP7.96□□□□□ -1.13
LIMD1-201ENST00000273317 MPPE1Q53F39 396 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 CHSY3Q70JA7 882 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 C12orf56Q8IXR9 622 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 HPS1Q92902 700 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 LINGO1Q96FE5 620 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 SENP8Q96LD8 212 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 ATXN3LQ9H3M9 355 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 ASB8Q9H765 288 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 BLOC1S4Q9NUP1 217 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 MTRRQ9UBK8 725 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 FBXO10Q9UK96 956 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 BAIAP2Q9UQB8 552 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 ALOX15BO15296 676 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 FABP3P05413 133 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 MATKP42679 507 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 TTC3P53804 2025 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 RBM20Q5T481 1227 aaKnown RBP7.96□□□□□ -1.13
LIMD1-201ENST00000273317 IQSEC1Q6DN90 963 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 RAET1GQ6H3X3 334 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 MGME1Q9BQP7 344 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 LHX5Q9H2C1 402 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 KCNMB3Q9NPA1 279 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 ZNF446Q9NWS9 450 aa7.96□□□□□ -1.13
LIMD1-201ENST00000273317 TSPAN3O60637 253 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 EDF1O60869 148 aaKnown RBP7.96□□□□□ -1.14
LIMD1-201ENST00000273317 SIN3BO75182 1162 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 ITPK1Q13572 414 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 MIIPQ5JXC2 388 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 SHC3Q92529 594 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 PTTG2Q9NZH5 202 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 PCDHB1Q9Y5F3 818 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 FADS2O95864 444 aaKnown RBP7.96□□□□□ -1.14
LIMD1-201ENST00000273317 ADH1CP00326 375 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 CYP4F2P78329 520 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 CYP4F3Q08477 520 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 LACTB2Q53H82 288 aaPredicted RBP7.96□□□□□ -1.14
LIMD1-201ENST00000273317 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms