RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 DTX1Q86Y01 620 aa15.21■□□□□ 0.03
SOD1-201ENST00000270142 SCARF2Q96GP6 870 aaPredicted RBP15.21■□□□□ 0.03
SOD1-201ENST00000270142 CCDC74BQ96LY2 380 aa15.21■□□□□ 0.03
SOD1-201ENST00000270142 SEMA3CQ99985 751 aa15.21■□□□□ 0.03
SOD1-201ENST00000270142 NUP85Q9BW27 656 aa15.21■□□□□ 0.03
SOD1-201ENST00000270142 ABCG8Q9H221 673 aa15.21■□□□□ 0.03
SOD1-201ENST00000270142 SEPT10Q9P0V9 454 aa15.21■□□□□ 0.03
SOD1-201ENST00000270142 IP6K2Q9UHH9 426 aa15.21■□□□□ 0.03
SOD1-201ENST00000270142 TMEM98Q9Y2Y6 226 aa15.21■□□□□ 0.03
SOD1-201ENST00000270142 UNC13CQ8NB66 2214 aa15.21■□□□□ 0.03
SOD1-201ENST00000270142 ZNF462Q96JM2 2506 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 HELZ2Q9BYK8 2649 aaKnown RBP15.2■□□□□ 0.02
SOD1-201ENST00000270142 IGHV5-10-1A0A0J9YXX1 117 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 PPM1DO15297 605 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 MAP3K6O95382 1288 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 WT1P19544 449 aaPredicted RBP15.2■□□□□ 0.02
SOD1-201ENST00000270142 CD1CP29017 333 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 ACTR1BP42025 376 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 ACTR1AP61163 376 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 PTSQ03393 145 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 ITKQ08881 620 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 BIRC2Q13490 618 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 IHHQ14623 411 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 CLPPQ16740 277 aaPredicted RBP15.2■□□□□ 0.02
SOD1-201ENST00000270142 NKAIN2Q5VXU1 208 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 NCBP2-AS2Q69YL0 99 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 TRIM74Q86UV6 250 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 FAM71BQ8TC56 605 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 EXTL1Q92935 676 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 SCAMP4Q969E2 229 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 PMEPA1Q969W9 287 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 AP2M1Q96CW1 435 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 OR2M4Q96R27 311 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 AGAP2Q99490 1192 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 FUCA2Q9BTY2 467 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 POLR1EQ9GZS1 481 aaKnown RBP15.2■□□□□ 0.02
SOD1-201ENST00000270142 CDH19Q9H159 772 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 AKAP7Q9P0M2 348 aaPredicted RBP15.2■□□□□ 0.02
SOD1-201ENST00000270142 RCOR3Q9P2K3 495 aaPredicted RBP15.2■□□□□ 0.02
SOD1-201ENST00000270142 PCDHGA4Q9Y5G9 962 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 COL6A6A6NMZ7 2263 aa15.2■□□□□ 0.02
SOD1-201ENST00000270142 ARHGEF17Q96PE2 2063 aaPredicted RBP15.2■□□□□ 0.02
SOD1-201ENST00000270142 A0A0J9YYE9 177 aa15.19■□□□□ 0.02
SOD1-201ENST00000270142 A0A1W2PQJ5 194 aa15.19■□□□□ 0.02
SOD1-201ENST00000270142 HGSO14964 777 aaPredicted RBP15.19■□□□□ 0.02
SOD1-201ENST00000270142 TRBC1P01850 177 aa15.19■□□□□ 0.02
SOD1-201ENST00000270142 CYP1A2P05177 515 aa15.19■□□□□ 0.02
SOD1-201ENST00000270142 CD82P27701 267 aa15.19■□□□□ 0.02
SOD1-201ENST00000270142 CSF2RBP32927 897 aa15.19■□□□□ 0.02
SOD1-201ENST00000270142 PBX1P40424 430 aa15.19■□□□□ 0.02
SOD1-201ENST00000270142 GARSP41250 739 aaKnown RBP15.19■□□□□ 0.02
SOD1-201ENST00000270142 GPR3P46089 330 aa15.19■□□□□ 0.02
SOD1-201ENST00000270142 ARSDP51689 593 aa15.19■□□□□ 0.02
SOD1-201ENST00000270142 ARSEP51690 589 aa15.19■□□□□ 0.02
SOD1-201ENST00000270142 DSC2Q02487 901 aa15.19■□□□□ 0.02
SOD1-201ENST00000270142 GALNT2Q10471 571 aa15.19■□□□□ 0.02
SOD1-201ENST00000270142 DPYSL3Q14195 570 aa15.19■□□□□ 0.02
SOD1-201ENST00000270142 CAVIN1Q6NZI2 390 aaKnown RBP15.19■□□□□ 0.02
SOD1-201ENST00000270142 ADAMTSL4Q6UY14 1074 aa15.19■□□□□ 0.02
SOD1-201ENST00000270142 MARK2Q7KZI7 788 aaKnown RBP15.19■□□□□ 0.02
SOD1-201ENST00000270142 CPNE8Q86YQ8 564 aa15.19■□□□□ 0.02
SOD1-201ENST00000270142 LRRC49Q8IUZ0 686 aa15.19■□□□□ 0.02
SOD1-201ENST00000270142 NDUFAF2Q8N183 169 aa15.19■□□□□ 0.02
SOD1-201ENST00000270142 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.19■□□□□ 0.02
SOD1-201ENST00000270142 MAML1Q92585 1016 aa15.19■□□□□ 0.02
SOD1-201ENST00000270142 TDRD1Q9BXT4 1180 aaKnown RBP15.19■□□□□ 0.02
SOD1-201ENST00000270142 PCDHB11Q9Y5F2 797 aa15.19■□□□□ 0.02
SOD1-201ENST00000270142 BZW2Q9Y6E2 419 aaKnown RBP15.19■□□□□ 0.02
SOD1-201ENST00000270142 IGHV1OR21-1A0A087WYE8 117 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 A0A087X0T9 212 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 ZW10O43264 779 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 SLC28A2O43868 658 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 SERPING1P05155 500 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 FAM228BP0C875 321 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 THRAP10827 490 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 FGF3P11487 239 aaPredicted RBP15.18■□□□□ 0.02
SOD1-201ENST00000270142 ZNF30P17039 623 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 MPSTP25325 297 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 GJC1P36383 396 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 SSR1P43307 286 aaKnown RBP15.18■□□□□ 0.02
SOD1-201ENST00000270142 STC1P52823 247 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 LIMK2P53671 638 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 NFATC3Q12968 1075 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 PEX6Q13608 980 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 PAFAH1B3Q15102 231 aaKnown RBP15.18■□□□□ 0.02
SOD1-201ENST00000270142 ATP13A4Q4VNC1 1196 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 PYCR3Q53H96 274 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 TMEM164Q5U3C3 297 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 ALG1LQ6GMV1 187 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 ZNF765Q7L2R6 523 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 NLRP8Q86W28 1048 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 LRRN4Q8WUT4 740 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 JPH3Q8WXH2 748 aaPredicted RBP15.18■□□□□ 0.02
SOD1-201ENST00000270142 SYN2Q92777 582 aaPredicted RBP15.18■□□□□ 0.02
SOD1-201ENST00000270142 COX14Q96I36 57 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 B3GNT4Q9C0J1 378 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 RBM22Q9NW64 420 aaKnown RBP eCLIP15.18■□□□□ 0.02
SOD1-201ENST00000270142 TMEM9Q9P0T7 183 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 CHKBQ9Y259 395 aa15.18■□□□□ 0.02
SOD1-201ENST00000270142 TTLL3Q9Y4R7 772 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms