RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 AARSD1Q9BTE6 412 aaKnown RBP12.88□□□□□ -0.35
CPSF6-201ENST00000266679 TRMOQ9BU70 441 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 ERVK-6Q9BXR3 956 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 FBRSL1Q9HCM7 1045 aaKnown RBP12.88□□□□□ -0.35
CPSF6-201ENST00000266679 PDP2Q9P2J9 529 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 SEPT3Q9UH03 358 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 BCAP29Q9UHQ4 241 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 PCDHGA7Q9Y5G6 932 aa12.88□□□□□ -0.35
CPSF6-201ENST00000266679 CUL9Q8IWT3 2517 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 E7ENX8 843 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 H3BMM5 538 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 FBP2O00757 339 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 TBC1D4O60343 1298 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 BCAS2O75934 225 aaPredicted RBP12.87□□□□□ -0.35
CPSF6-201ENST00000266679 RHOBTB1O94844 696 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 ACRP10323 421 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 CSF2RAP15509 400 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 ZNF37AP17032 561 aaPredicted RBP12.87□□□□□ -0.35
CPSF6-201ENST00000266679 RPL17P18621 184 aaKnown RBP12.87□□□□□ -0.35
CPSF6-201ENST00000266679 SCNN1BP51168 640 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 SGSHP51688 502 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 STC1P52823 247 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 NFKB2Q00653 900 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 GALNT1Q10472 559 aaPredicted RBP12.87□□□□□ -0.35
CPSF6-201ENST00000266679 MED21Q13503 144 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 GEN1Q17RS7 908 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 TCTN1Q2MV58 587 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 ACBD5Q5T8D3 534 aaPredicted RBP12.87□□□□□ -0.35
CPSF6-201ENST00000266679 FAM109BQ6ICB4 259 aaPredicted RBP12.87□□□□□ -0.35
CPSF6-201ENST00000266679 ZFP1Q6P2D0 407 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 LAYNQ6UX15 382 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 DENND1CQ8IV53 801 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 OR9I1Q8NGQ6 314 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 RMDN1Q96DB5 314 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 C19orf60Q96EN9 201 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 C3orf30Q96M34 536 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 PRICKLE1Q96MT3 831 aaPredicted RBP12.87□□□□□ -0.35
CPSF6-201ENST00000266679 ELAC1Q9H777 363 aaKnown RBP12.87□□□□□ -0.35
CPSF6-201ENST00000266679 COMMD8Q9NX08 183 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 CACNA2D2Q9NY47 1150 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 GIMAP2Q9UG22 337 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 DNMT3LQ9UJW3 386 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 PTGDR2Q9Y5Y4 395 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 XIRP2A4UGR9 3374 aa12.87□□□□□ -0.35
CPSF6-201ENST00000266679 TBKBP1A7MCY6 615 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 SUPT3HB4E1H0 165 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 MRASO14807 208 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 PEX1O43933 1283 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 SUPT3HO75486 399 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 TIMP1P01033 207 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 EPOP01588 193 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 FMO4P31512 558 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 ATP5C1P36542 298 aaKnown RBP12.86□□□□□ -0.35
CPSF6-201ENST00000266679 CCNHP51946 323 aaPredicted RBP12.86□□□□□ -0.35
CPSF6-201ENST00000266679 ZNF140P52738 457 aaPredicted RBP12.86□□□□□ -0.35
CPSF6-201ENST00000266679 RALGDSQ12967 914 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 STX5Q13190 355 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 PFKFB4Q16877 469 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 FBXL19Q6PCT2 694 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 CYHR1Q6ZMK1 362 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 GLT6D1Q7Z4J2 308 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 RAB44Q7Z6P3 723 aaPredicted RBP12.86□□□□□ -0.35
CPSF6-201ENST00000266679 SLC43A3Q8NBI5 491 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 OR4K2Q8NGD2 314 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 CDKN2AIPNLQ96HQ2 116 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 ZNF512Q96ME7 567 aaPredicted RBP12.86□□□□□ -0.35
CPSF6-201ENST00000266679 NSUN5Q96P11 429 aaKnown RBP12.86□□□□□ -0.35
CPSF6-201ENST00000266679 GBP5Q96PP8 586 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 TTPALQ9BTX7 342 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 MAGEH1Q9H213 219 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 MID1IP1Q9NPA3 183 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 UTP6Q9NYH9 597 aaKnown RBP12.86□□□□□ -0.35
CPSF6-201ENST00000266679 RIMS3Q9UJD0 308 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 ASB3Q9Y575 518 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 TET1Q8NFU7 2136 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 PPP6CO00743 305 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 ACOT8O14734 319 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 TSPAN3O60637 253 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 GALTP07902 379 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 SNRPB2P08579 225 aaKnown RBP12.86□□□□□ -0.35
CPSF6-201ENST00000266679 IRF1P10914 325 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 GFAPP14136 432 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 VCLP18206 1134 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 SLC11A2P49281 568 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 SUOXP51687 545 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 NME5P56597 212 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 SH3BP2P78314 561 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 LRP8Q14114 963 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 GPNMBQ14956 572 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 RARS2Q5T160 578 aaKnown RBP12.86□□□□□ -0.35
CPSF6-201ENST00000266679 ALG1LQ6GMV1 187 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 PAOXQ6QHF9 649 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 ANKS3Q6ZW76 656 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 C16orf59Q7L2K0 433 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 LPCAT1Q8NF37 534 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 PEX13Q92968 403 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 GUCD1Q96NT3 240 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 PKP2Q99959 881 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 SCUBE2Q9NQ36 999 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 NLE1Q9NVX2 485 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 180.9 ms