RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 ANKRD49Q8WVL7 239 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 ZNF641Q96N77 438 aaPredicted RBP11.53□□□□□ -0.56
SCAF11-201ENST00000266589 CCDC68Q9H2F9 335 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 MRPL46Q9H2W6 279 aaKnown RBP11.53□□□□□ -0.56
SCAF11-201ENST00000266589 OXSMQ9NWU1 459 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 OBP2AQ9NY56 170 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 MARCOQ9UEW3 520 aaPredicted RBP11.53□□□□□ -0.56
SCAF11-201ENST00000266589 VPS9D1Q9Y2B5 631 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 MTF2Q9Y483 593 aaPredicted RBP11.53□□□□□ -0.56
SCAF11-201ENST00000266589 SLC30A1Q9Y6M5 507 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 COL4A3Q01955 1670 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 OTOL1A6NHN0 477 aaPredicted RBP11.53□□□□□ -0.56
SCAF11-201ENST00000266589 TARM1B6A8C7 271 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 WASH3PC4AMC7 463 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 PFDN6O15212 129 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 SRP72O76094 671 aaKnown RBP11.53□□□□□ -0.56
SCAF11-201ENST00000266589 ATP5BP06576 529 aaKnown RBP11.53□□□□□ -0.56
SCAF11-201ENST00000266589 DLDP09622 509 aaKnown RBP11.53□□□□□ -0.56
SCAF11-201ENST00000266589 KITP10721 976 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 TIAL1Q01085 375 aaKnown RBP eCLIP11.53□□□□□ -0.56
SCAF11-201ENST00000266589 SEMG2Q02383 582 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 CACNG1Q06432 222 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 PTPRNQ16849 979 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 KLC3Q6P597 504 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 TMEM207Q6UWW9 146 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 FAM151BQ6UXP7 276 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 USP45Q70EL2 814 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 TAS2R42Q7RTR8 314 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 TSPAN33Q86UF1 283 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 ETFBKMTQ8IXQ9 262 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 FITM2Q8N6M3 262 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 OR6Y1Q8NGX8 325 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 FAM136AQ96C01 138 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 SCRN2Q96FV2 425 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 UBXN10Q96LJ8 280 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 LYSMD1Q96S90 227 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 MRPL57Q9BQC6 102 aaKnown RBP11.53□□□□□ -0.56
SCAF11-201ENST00000266589 FAM83CQ9BQN1 747 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 TMEM120AQ9BXJ8 343 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 TRPV4Q9HBA0 871 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 CDH7Q9ULB5 785 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 SLC8A2Q9UPR5 921 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 SLC27A6Q9Y2P4 619 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 KIAA1549LQ6ZVL6 1849 aa11.53□□□□□ -0.56
SCAF11-201ENST00000266589 OR1I1O60431 355 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 H2AFYO75367 372 aaKnown RBP11.52□□□□□ -0.57
SCAF11-201ENST00000266589 PRAMEF1O95521 474 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 ASLP04424 464 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 SRPRAP08240 638 aaKnown RBP11.52□□□□□ -0.57
SCAF11-201ENST00000266589 ARRB2P32121 409 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 SUOXP51687 545 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 ARFIP2P53365 341 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 ABCE1P61221 599 aaKnown RBP11.52□□□□□ -0.57
SCAF11-201ENST00000266589 PDAP1Q13442 181 aaKnown RBP11.52□□□□□ -0.57
SCAF11-201ENST00000266589 GAB4Q2WGN9 574 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 TECRLQ5HYJ1 363 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 LIPMQ5VYY2 423 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 TANGO2Q6ICL3 276 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 CRTC1Q6UUV9 634 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 VITQ6UXI7 678 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 GDPD4Q6W3E5 623 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 NAPRTQ6XQN6 538 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 PLPP6Q8IY26 295 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 PPP4R1Q8TF05 950 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 SGF29Q96ES7 293 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 KLHL32Q96NJ5 620 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 HEPHQ9BQS7 1158 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 ECT2Q9H8V3 914 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 KCNK13Q9HB14 408 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 POPDC3Q9HBV1 291 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 ZFP14Q9HCL3 533 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 THG1LQ9NWX6 298 aaKnown RBP11.52□□□□□ -0.57
SCAF11-201ENST00000266589 PPIL1Q9Y3C6 166 aa11.52□□□□□ -0.57
SCAF11-201ENST00000266589 PRRC2BQ5JSZ5 2229 aaKnown RBP11.52□□□□□ -0.57
SCAF11-201ENST00000266589 GAPDHSO14556 408 aaPredicted RBP11.51□□□□□ -0.57
SCAF11-201ENST00000266589 DLX3O60479 287 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 DCTN3O75935 186 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 RHOBTB1O94844 696 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 UBOX5O94941 541 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 SLC26A3P40879 764 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 SLC6A11P48066 632 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 CORO7P57737 925 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 KDSRQ06136 332 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 MESP2Q0VG99 397 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 SETDB1Q15047 1291 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 PDGFRLQ15198 375 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 LACTB2Q53H82 288 aaPredicted RBP11.51□□□□□ -0.57
SCAF11-201ENST00000266589 LRRC73Q5JTD7 316 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 LRRC66Q68CR7 880 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 ATG14Q6ZNE5 492 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 TPRG1Q6ZUI0 275 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 NXPE3Q969Y0 559 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.51□□□□□ -0.57
SCAF11-201ENST00000266589 BIRC8Q96P09 236 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 MCCC1Q96RQ3 725 aaPredicted RBP11.51□□□□□ -0.57
SCAF11-201ENST00000266589 SORT1Q99523 831 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 C19orf43Q9BQ61 176 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 GATA5Q9BWX5 397 aaPredicted RBP11.51□□□□□ -0.57
SCAF11-201ENST00000266589 MTG2Q9H4K7 406 aa11.51□□□□□ -0.57
SCAF11-201ENST00000266589 HPS4Q9NQG7 708 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms