RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ADGRE3Q9BY15 652 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 GOLPH3Q9H4A6 298 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 DPEP2Q9H4A9 486 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 RABGEF1Q9UJ41 708 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 SUFUQ9UMX1 484 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 TFR2Q9UP52 801 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 ENTPD2Q9Y5L3 495 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 EPN1Q9Y6I3 576 aaPredicted RBP16.02■□□□□ 0.16
USE1-201ENST00000263897 CACNA1GO43497 2377 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 A0A0A6YYK5 440 aaPredicted RBP16.01■□□□□ 0.15
USE1-201ENST00000263897 CST8O60676 142 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 DXOO77932 396 aaKnown RBP16.01■□□□□ 0.15
USE1-201ENST00000263897 ZRANB2O95218 330 aaKnown RBP eCLIP16.01■□□□□ 0.15
USE1-201ENST00000263897 PYGLP06737 847 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 IVLP07476 585 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 GABREP78334 506 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 CCL7P80098 99 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 SPIDRQ14159 915 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 TBC1D25Q3MII6 688 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 TEX44Q53QW1 395 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 SPOCD1Q6ZMY3 1216 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 B4GALNT4Q76KP1 1039 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 NT5DC3Q86UY8 548 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 SFTPA2Q8IWL1 248 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 RCOR2Q8IZ40 523 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 EXD1Q8NHP7 514 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 PTCD2Q8WV60 388 aaKnown RBP16.01■□□□□ 0.15
USE1-201ENST00000263897 IMP4Q96G21 291 aaKnown RBP16.01■□□□□ 0.15
USE1-201ENST00000263897 SCARF2Q96GP6 870 aaPredicted RBP16.01■□□□□ 0.15
USE1-201ENST00000263897 ATXN7L3BQ96GX2 97 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 HIC2Q96JB3 615 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 AGAP3Q96P47 875 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 AGAP2Q99490 1192 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 RIOK2Q9BVS4 552 aaKnown RBP16.01■□□□□ 0.15
USE1-201ENST00000263897 GSDMCQ9BYG8 508 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 CEP41Q9BYV8 373 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 SLC25A51Q9H1U9 297 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 LUC7LQ9NQ29 371 aaKnown RBP16.01■□□□□ 0.15
USE1-201ENST00000263897 SPATS2LQ9NUQ6 558 aaKnown RBP16.01■□□□□ 0.15
USE1-201ENST00000263897 SEPT10Q9P0V9 454 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 SAE1Q9UBE0 346 aaPredicted RBP16.01■□□□□ 0.15
USE1-201ENST00000263897 TMEM98Q9Y2Y6 226 aa16.01■□□□□ 0.15
USE1-201ENST00000263897 C1orf232A0A0U1RR37 186 aa16■□□□□ 0.15
USE1-201ENST00000263897 RRP8O43159 456 aaKnown RBP16■□□□□ 0.15
USE1-201ENST00000263897 FGF1P05230 155 aa16■□□□□ 0.15
USE1-201ENST00000263897 PNLIPP16233 465 aa16■□□□□ 0.15
USE1-201ENST00000263897 GLB1P16278 677 aa16■□□□□ 0.15
USE1-201ENST00000263897 FECHP22830 423 aa16■□□□□ 0.15
USE1-201ENST00000263897 ADCY8P40145 1251 aa16■□□□□ 0.15
USE1-201ENST00000263897 GNPDA1P46926 289 aa16■□□□□ 0.15
USE1-201ENST00000263897 ILF3Q12906 894 aaKnown RBP eCLIP16■□□□□ 0.15
USE1-201ENST00000263897 LLGL1Q15334 1064 aa16■□□□□ 0.15
USE1-201ENST00000263897 C14orf28Q4W4Y0 310 aa16■□□□□ 0.15
USE1-201ENST00000263897 CERCAMQ5T4B2 595 aa16■□□□□ 0.15
USE1-201ENST00000263897 LRRC69Q6ZNQ3 347 aa16■□□□□ 0.15
USE1-201ENST00000263897 TMTC1Q8IUR5 882 aa16■□□□□ 0.15
USE1-201ENST00000263897 KATNAL2Q8IYT4 538 aa16■□□□□ 0.15
USE1-201ENST00000263897 CCHCR1Q8TD31 782 aa16■□□□□ 0.15
USE1-201ENST00000263897 TADA1Q96BN2 335 aa16■□□□□ 0.15
USE1-201ENST00000263897 ZNF578Q96N58 590 aaPredicted RBP16■□□□□ 0.15
USE1-201ENST00000263897 GFM1Q96RP9 751 aaKnown RBP16■□□□□ 0.15
USE1-201ENST00000263897 TRIB3Q96RU7 358 aa16■□□□□ 0.15
USE1-201ENST00000263897 WDR24Q96S15 920 aa16■□□□□ 0.15
USE1-201ENST00000263897 LRRN3Q9H3W5 708 aa16■□□□□ 0.15
USE1-201ENST00000263897 SUDS3Q9H7L9 328 aaPredicted RBP16■□□□□ 0.15
USE1-201ENST00000263897 LRIT1Q9P2V4 623 aa16■□□□□ 0.15
USE1-201ENST00000263897 APPL1Q9UKG1 709 aa16■□□□□ 0.15
USE1-201ENST00000263897 PTPRQQ9UMZ3 2332 aa16■□□□□ 0.15
USE1-201ENST00000263897 A0A1W2PNU3 283 aaPredicted RBP15.99■□□□□ 0.15
USE1-201ENST00000263897 A0A1W2PQM1 296 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 RGSL1A5PLK6 1076 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 B4DGG1 531 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 NDUFA10O95299 355 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 AK4P27144 223 aaPredicted RBP15.99■□□□□ 0.15
USE1-201ENST00000263897 ITPKBP27987 946 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 SPINT3P49223 89 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 ERVPABLB-1P60509 514 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 CTBSQ01459 385 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 ADCY2Q08462 1091 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 HLTFQ14527 1009 aaKnown RBP eCLIP15.99■□□□□ 0.15
USE1-201ENST00000263897 PRKD1Q15139 912 aaPredicted RBP15.99■□□□□ 0.15
USE1-201ENST00000263897 SLC14A2Q15849 920 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 TFDP3Q5H9I0 405 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 KAZNQ674X7 775 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 C11orf63Q6NUN7 778 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 DOK6Q6PKX4 331 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 IGF2-ASQ6U949 168 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 KDELC2Q7Z4H8 507 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 PDZD3Q86UT5 571 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 C17orf82Q86X59 251 aaPredicted RBP15.99■□□□□ 0.15
USE1-201ENST00000263897 GAS2L3Q86XJ1 694 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 KIAA1524Q8TCG1 905 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 TFB1MQ8WVM0 346 aaKnown RBP15.99■□□□□ 0.15
USE1-201ENST00000263897 COX14Q96I36 57 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 TEKT5Q96M29 485 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 FAM83DQ9H4H8 585 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 SYNDIG1Q9H7V2 258 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 GLOD4Q9HC38 313 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 TAAR2Q9P1P5 351 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 CNOT6Q9ULM6 557 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms