RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 NDUFAF1Q9Y375 327 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 A0A0D9SEW6 157 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 IQCF5A8MTL0 148 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 AZIN1O14977 448 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 CD3EAPO15446 510 aaKnown RBP9.11□□□□□ -0.95
MSH4-201ENST00000263187 RHOBTB1O94844 696 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 MMP2P08253 660 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 ZNF865P0CJ78 1059 aaPredicted RBP9.11□□□□□ -0.95
MSH4-201ENST00000263187 HSPA1AP0DMV8 641 aaKnown RBP9.11□□□□□ -0.95
MSH4-201ENST00000263187 HSPA1BP0DMV9 641 aaKnown RBP9.11□□□□□ -0.95
MSH4-201ENST00000263187 HSPA8P11142 646 aaKnown RBP9.11□□□□□ -0.95
MSH4-201ENST00000263187 LEPRP48357 1165 aaKnown RBP9.11□□□□□ -0.95
MSH4-201ENST00000263187 PIK3CGP48736 1102 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 PSMD7P51665 324 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 DNAJB13P59910 316 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 UFM1P61960 85 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 PAGE3Q5JUK9 113 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 TMEM214Q6NUQ4 689 aaKnown RBP9.11□□□□□ -0.95
MSH4-201ENST00000263187 RMDN1Q96DB5 314 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 UBXN10Q96LJ8 280 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 ADAM2Q99965 735 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 SLC25A51Q9H1U9 297 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 ABCC13Q9NSE7 274 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 POLR3BQ9NW08 1133 aaPredicted RBP9.11□□□□□ -0.95
MSH4-201ENST00000263187 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.11□□□□□ -0.95
MSH4-201ENST00000263187 POLG2Q9UHN1 485 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 PADI3Q9ULW8 664 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 PHF24Q9UPV7 400 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 ZNF711Q9Y462 761 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 ASB1Q9Y576 335 aa9.11□□□□□ -0.95
MSH4-201ENST00000263187 TCRBV3S1A0A5B6 114 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 NPEPPSL1A6NEC2 478 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 OR1I1O60431 355 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 KATNA1O75449 491 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 SNAP29O95721 258 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 GLP2RO95838 553 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 HOXD8P13378 290 aaPredicted RBP9.1□□□□□ -0.95
MSH4-201ENST00000263187 OR1E1P30953 314 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 HSPA13P48723 471 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 CLCN5P51795 746 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 HERVK_113P63132 956 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 TSPY1Q01534 308 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 RBBP7Q16576 425 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 NHSL2Q5HYW2 709 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 XKR5Q6UX68 686 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 FAM43BQ6ZT52 329 aaPredicted RBP9.1□□□□□ -0.95
MSH4-201ENST00000263187 ZNF280BQ86YH2 543 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 CLYBLQ8N0X4 340 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 MIER2Q8N344 545 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 EFHBQ8N7U6 833 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 PCYOX1LQ8NBM8 494 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 MIPOL1Q8TD10 442 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 SLC30A3Q99726 388 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 HAUS8Q9BT25 410 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 ERVK-6Q9BXR3 956 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 TBC1D13Q9NVG8 400 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 INTS7Q9NVH2 962 aaKnown RBP9.1□□□□□ -0.95
MSH4-201ENST00000263187 RRN3Q9NYV6 651 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 RNF112Q9ULX5 631 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 COMMD10Q9Y6G5 202 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 GIPC1O14908 333 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 ARPC2O15144 300 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 CACNG3O60359 315 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 PEX11BO96011 259 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 CD1DP15813 335 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 ZNF23P17027 643 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 ITGB6P18564 788 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 RENBPP51606 427 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 IST1P53990 364 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 MLLT6P55198 1093 aaPredicted RBP9.1□□□□□ -0.95
MSH4-201ENST00000263187 TBX4P57082 545 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 MYBPC3Q14896 1274 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 KCTD21Q4G0X4 260 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 LDLRAD1Q5T700 205 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 FBXL22Q6P050 247 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 DNAJC14Q6Y2X3 702 aaPredicted RBP9.1□□□□□ -0.95
MSH4-201ENST00000263187 ANKRD23Q86SG2 305 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 PARP8Q8N3A8 854 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 CDYL2Q8N8U2 506 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 ZNF784Q8NCA9 323 aaPredicted RBP9.1□□□□□ -0.95
MSH4-201ENST00000263187 OR10Q1Q8NGQ4 319 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 DDI1Q8WTU0 396 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 SGCDQ92629 289 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 TSPAN17Q96FV3 270 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 IMP4Q96G21 291 aaKnown RBP9.1□□□□□ -0.95
MSH4-201ENST00000263187 PPM1MQ96MI6 270 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 RNF145Q96MT1 663 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 TCF12Q99081 682 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 ADI1Q9BV57 179 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 CLK4Q9HAZ1 481 aaKnown RBP9.1□□□□□ -0.95
MSH4-201ENST00000263187 CSNK1G1Q9HCP0 422 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 PNPLA3Q9NST1 481 aa9.1□□□□□ -0.95
MSH4-201ENST00000263187 AP3B1O00203 1094 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 BTN3A1O00481 513 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 SLC22A2O15244 555 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 CLOCKO15516 846 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 LDB2O43679 373 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 BMP1P13497 986 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 IL10P22301 178 aa9.09□□□□□ -0.95
MSH4-201ENST00000263187 SLC6A2P23975 617 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms