RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 CNPP09543 421 aaKnown RBP12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 RAG1P15918 1043 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 MC4RP32245 332 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 GCKP35557 465 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 AP1S1P61966 158 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 ZXDBP98169 803 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 CYP4F8P98187 520 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 RAD51Q06609 339 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 CYLC2Q14093 348 aaPredicted RBP12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 LRRC26Q2I0M4 334 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 AARS2Q5JTZ9 985 aaKnown RBP12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 RETSATQ6NUM9 610 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 SNX32Q86XE0 403 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 MAB21L3Q8N8X9 362 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 DDI1Q8WTU0 396 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 EXT2Q93063 718 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 BHMTQ93088 406 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 ALG14Q96F25 216 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 ASB2Q96Q27 587 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 SMIM14Q96QK8 99 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 DERL2Q9GZP9 239 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 ZBP1Q9H171 429 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 C11orf49Q9H6J7 331 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 MEAF6Q9HAF1 191 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 FKBPLQ9UIM3 349 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 ANGPTL2Q9UKU9 493 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 FIS1Q9Y3D6 152 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 SH3BP1Q9Y3L3 701 aa12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 MTF2Q9Y483 593 aaPredicted RBP12.9□□□□□ -0.34
SPTLC1-201ENST00000262554 TGM5O43548 720 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 SKAP2O75563 359 aaPredicted RBP12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 BAIAP3O94812 1187 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 RPSAP08865 295 aaKnown RBP12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 ACRP10323 421 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 CTSAP10619 480 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 ITGB8P26012 769 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 SESN3P58005 492 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 SLC7A9P82251 487 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 BTKQ06187 659 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 TBL3Q12788 808 aaKnown RBP12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 PEX6Q13608 980 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 HERC3Q15034 1050 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 PTPRNQ16849 979 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 ZRANB3Q5FWF4 1079 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 ATXN7L2Q5T6C5 722 aaPredicted RBP12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 TMEM198Q66K66 360 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 CCDC149Q6ZUS6 474 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 GAREM2Q75VX8 874 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 ELMOD1Q8N336 334 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 TTC30BQ8N4P2 665 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 TMEM199Q8N511 208 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 WFDC5Q8TCV5 224 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 FAM136AQ96C01 138 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 ZBTB26Q9HCK0 441 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 BPIFA1Q9NP55 256 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 CDH22Q9UJ99 828 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 FAM50BQ9Y247 325 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 PKP3Q9Y446 797 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 TRAF6Q9Y4K3 522 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 PCDHB9Q9Y5E1 797 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 PTPRSQ13332 1948 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 TRAV19A0A0A6YYK7 116 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 LCHNA4D1U4 455 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 TRIM43BA6NCK2 446 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 H7C0S8 307 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 AIM2O14862 343 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 TBX10O75333 385 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 VPS26AO75436 327 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 VHLP40337 213 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 CDKN1CP49918 316 aaPredicted RBP12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 ATP6V0D1P61421 351 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 AP2B1P63010 937 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 TAF11Q15544 211 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 OR4D1Q15615 310 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 MPPE1Q53F39 396 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 UNC50Q53HI1 259 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 MPP7Q5T2T1 576 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 IER5LQ5T953 404 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 ARMC12Q5T9G4 340 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 PSAPL1Q6NUJ1 521 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 TLDC1Q6P9B6 456 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 PGM2L1Q6PCE3 622 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 PAQR3Q6TCH7 311 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 C16orf89Q6UX73 402 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 HTR3DQ70Z44 454 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 RPS27LQ71UM5 84 aaKnown RBP12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 MYLK4Q86YV6 388 aaPredicted RBP12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 CPXM2Q8N436 756 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 NKAPQ8N5F7 415 aaKnown RBP12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 PTGR2Q8N8N7 351 aaPredicted RBP12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 KYQ8NBH2 561 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 GIMAP7Q8NHV1 300 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 STAG3L4Q8TBR4 150 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 DTX3LQ8TDB6 740 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 KIAA1191Q96A73 305 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 TRIM43Q96BQ3 446 aaPredicted RBP12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 MYO19Q96H55 970 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 ZNF333Q96JL9 665 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 GCNAQ96QF7 691 aa12.89□□□□□ -0.35
SPTLC1-201ENST00000262554 GPR63Q9BZJ6 419 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms