RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 CNTRLQ7Z7A1 2325 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 MIF4GDA9UHW6 222 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 JCHAINP01591 159 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 ITGA2BP08514 1039 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 ABHD2P08910 425 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 P4HA1P13674 534 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 GABRR2P28476 465 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 ALDH3A1P30838 453 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 SMAD3P84022 425 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 LRRC14Q15048 493 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 SMAD2Q15796 467 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 ZNF284Q2VY69 593 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 ITPRIPL2Q3MIP1 535 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 HABP4Q5JVS0 413 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 DARS2Q6PI48 645 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 GLB1LQ6UWU2 654 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 LILRA2Q8N149 483 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 ZNF740Q8NDX6 193 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 ENAMQ9NRM1 1142 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 COPG2Q9UBF2 871 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 SOX13Q9UN79 622 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 YLPM1P49750 1951 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 TCAF2A6NFQ2 919 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 UPK3BL1B0FP48 263 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 UPK3BL2E5RIL1 263 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 M0QZ92 97 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 PHACTR2O75167 634 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 TYRP14679 529 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 CASQ1P31415 396 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 HTR6P50406 440 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 PITRM1Q5JRX3 1037 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 CFAP157Q5JU67 520 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 PGM2L1Q6PCE3 622 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 GOLGA1Q92805 767 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 CCDC106Q9BWC9 280 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 ABCB8Q9NUT2 735 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 SLC25A37Q9NYZ2 338 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 USP36Q9P275 1121 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 COQ6Q9Y2Z9 468 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 KMT2CQ8NEZ4 4911 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 ANKRD66B4E2M5 251 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 CALB1P05937 261 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 TYRP1P17643 537 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 LSP1P33241 339 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 SLC18A1P54219 525 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 EIF3EP60228 445 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 HNRNPDQ14103 355 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 HOMEZQ8IX15 550 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 AFAP1L2Q8N4X5 818 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 ANKRD53Q8N9V6 530 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 SLC38A9Q8NBW4 561 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 TTC8Q8TAM2 541 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 FAM161BQ96MY7 647 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 NSRP1Q9H0G5 558 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 MRPL40Q9NQ50 206 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 SHOC2Q9UQ13 582 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 MEGF8Q7Z7M0 2845 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 GFYI3L273 518 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 MAP3K7O43318 606 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 CXCL14O95715 111 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 NID1P14543 1247 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 RHOQP17081 205 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 ATP5DP30049 168 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 P2RY2P41231 377 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 ZNF33AQ06730 810 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 ZNF234Q14588 700 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 FAM20CQ8IXL6 584 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 TMEM52Q8NDY8 209 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 STYXQ8WUJ0 223 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 PATE1Q8WXA2 126 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 OVCA2Q8WZ82 227 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 SPHK2Q9NRA0 654 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 UXTQ9UBK9 157 aaPredicted RBP5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 USP15Q9Y4E8 981 aaPredicted RBP5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 MYO18BQ8IUG5 2567 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 SYNJ2BP-COX16A0A087WUM0 186 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 KCNN4O15554 427 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 SLC7A4O43246 635 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 NME6O75414 186 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 NFKBIAP25963 317 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 HMGCLP35914 325 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 FUT5Q11128 374 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 DHX34Q14147 1143 aaKnown RBP5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 E2F5Q15329 346 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 C6orf10Q5SRN2 563 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 LETMD1Q6P1Q0 360 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 ANKS3Q6ZW76 656 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 WDR60Q8WVS4 1066 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 NPAS1Q99742 590 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 HEBP1Q9NRV9 189 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 INTS7Q9NVH2 962 aaKnown RBP5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 COX16Q9P0S2 106 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 FAM8A1Q9UBU6 413 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 FETUBQ9UGM5 382 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 PCDHB7Q9Y5E2 793 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 RAI1Q7Z5J4 1906 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 GOLGA8RI6L899 631 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 HUS1O60921 280 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 CD1DP15813 335 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 CHRM3P20309 590 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms