RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 C8orf48Q96LL4 319 aa15.21■□□□□ 0.03
DDX56-201ENST00000258772 NSUN5Q96P11 429 aaKnown RBP15.21■□□□□ 0.03
DDX56-201ENST00000258772 ATOH8Q96SQ7 321 aa15.21■□□□□ 0.03
DDX56-201ENST00000258772 CCT7Q99832 543 aa15.21■□□□□ 0.03
DDX56-201ENST00000258772 DUS2Q9NX74 493 aaKnown RBP15.21■□□□□ 0.03
DDX56-201ENST00000258772 CEPT1Q9Y6K0 416 aa15.21■□□□□ 0.03
DDX56-201ENST00000258772 H3BNH8 94 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 SOCS2O14508 198 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 B4GALT3O60512 393 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 RPP40O75818 363 aaKnown RBP15.21■□□□□ 0.02
DDX56-201ENST00000258772 CELF2O95319 508 aaKnown RBP15.21■□□□□ 0.02
DDX56-201ENST00000258772 ZNF23P17027 643 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 HLA-DPA1P20036 260 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 CAPN3P20807 821 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 NHSL2Q5HYW2 709 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 KANK2Q63ZY3 851 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 KRT80Q6KB66 452 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 ZNF598Q86UK7 904 aaKnown RBP15.21■□□□□ 0.02
DDX56-201ENST00000258772 DDIASQ8IXT1 998 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 DCP1BQ8IZD4 617 aaKnown RBP15.21■□□□□ 0.02
DDX56-201ENST00000258772 MINDY1Q8N5J2 469 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 OR13C4Q8NGS5 318 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 BRSK1Q8TDC3 778 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 POLR1EQ9GZS1 481 aaKnown RBP15.21■□□□□ 0.02
DDX56-201ENST00000258772 TUBB1Q9H4B7 451 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 TFB2MQ9H5Q4 396 aaKnown RBP15.21■□□□□ 0.02
DDX56-201ENST00000258772 CAAP1Q9H8G2 361 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 POPDC3Q9HBV1 291 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 PNPLA3Q9NST1 481 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 DDX18Q9NVP1 670 aaKnown RBP15.21■□□□□ 0.02
DDX56-201ENST00000258772 THEGQ9P2T0 379 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 ATXN10Q9UBB4 475 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 MYRFQ9Y2G1 1151 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 CROCCQ5TZA2 2017 aa15.21■□□□□ 0.02
DDX56-201ENST00000258772 DRGXA6NNA5 263 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 FAM155AB1AL88 458 aaPredicted RBP15.2■□□□□ 0.02
DDX56-201ENST00000258772 PLOD2O00469 737 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 MUSKO15146 869 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 OAZ2O95190 189 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 FGF1P05230 155 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 RPLP2P05387 115 aaKnown RBP15.2■□□□□ 0.02
DDX56-201ENST00000258772 LBPP18428 481 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 NELFEP18615 380 aaKnown RBP15.2■□□□□ 0.02
DDX56-201ENST00000258772 CDH2P19022 906 aaPredicted RBP15.2■□□□□ 0.02
DDX56-201ENST00000258772 PRMT9Q6P2P2 845 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 C17orf99Q6UX52 265 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 CIR1Q86X95 450 aaPredicted RBP15.2■□□□□ 0.02
DDX56-201ENST00000258772 ZNF280BQ86YH2 543 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 OR4L1Q8NH43 312 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 GRIN3AQ8TCU5 1115 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 TRPC4APQ8TEL6 797 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 FUBP3Q96I24 572 aaKnown RBP eCLIP15.2■□□□□ 0.02
DDX56-201ENST00000258772 FEM1CQ96JP0 617 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 KCNA7Q96RP8 456 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 TCF12Q99081 682 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 AARSD1Q9BTE6 412 aaKnown RBP15.2■□□□□ 0.02
DDX56-201ENST00000258772 ANKRD60Q9BZ19 345 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 CATSPERZQ9NTU4 200 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 AQP12BA6NM10 295 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 ANGPT2O15123 496 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 CLASP2O75122 1294 aaKnown RBP15.2■□□□□ 0.02
DDX56-201ENST00000258772 MATN4O95460 622 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 EPOP01588 193 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 PIRTP0C851 137 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 HSD17B1P14061 328 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 GFAPP14136 432 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 SLC5A2P31639 672 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 ACVRL1P37023 503 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 ATP6V0D1P61421 351 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 GALNT3Q14435 633 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 TRIP4Q15650 581 aaPredicted RBP15.2■□□□□ 0.02
DDX56-201ENST00000258772 PARP15Q460N3 678 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 PABPC1LQ4VXU2 614 aaKnown RBP15.2■□□□□ 0.02
DDX56-201ENST00000258772 MIB1Q86YT6 1006 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 AQP12AQ8IXF9 295 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 TUBGCP3Q96CW5 907 aa15.2■□□□□ 0.02
DDX56-201ENST00000258772 ZNF512Q96ME7 567 aaPredicted RBP15.2■□□□□ 0.02
DDX56-201ENST00000258772 RPRD1AQ96P16 312 aaPredicted RBP15.2■□□□□ 0.02
DDX56-201ENST00000258772 SDR39U1Q9NRG7 319 aaPredicted RBP15.2■□□□□ 0.02
DDX56-201ENST00000258772 ANKRD12Q6UB98 2062 aa15.19■□□□□ 0.02
DDX56-201ENST00000258772 C9JVG2 144 aa15.19■□□□□ 0.02
DDX56-201ENST00000258772 FXYD1O00168 92 aa15.19■□□□□ 0.02
DDX56-201ENST00000258772 HNRNPRO43390 633 aaKnown RBP15.19■□□□□ 0.02
DDX56-201ENST00000258772 TMCC1O94876 653 aa15.19■□□□□ 0.02
DDX56-201ENST00000258772 LINC00032P0C843 101 aa15.19■□□□□ 0.02
DDX56-201ENST00000258772 HGFP14210 728 aa15.19■□□□□ 0.02
DDX56-201ENST00000258772 OGNP20774 298 aaKnown RBP15.19■□□□□ 0.02
DDX56-201ENST00000258772 SLC6A2P23975 617 aa15.19■□□□□ 0.02
DDX56-201ENST00000258772 PCSK6P29122 969 aa15.19■□□□□ 0.02
DDX56-201ENST00000258772 OR1E1P30953 314 aa15.19■□□□□ 0.02
DDX56-201ENST00000258772 ALDH3B2P48448 385 aa15.19■□□□□ 0.02
DDX56-201ENST00000258772 STC1P52823 247 aa15.19■□□□□ 0.02
DDX56-201ENST00000258772 YBX1P67809 324 aaKnown RBP15.19■□□□□ 0.02
DDX56-201ENST00000258772 CLCQ05315 142 aa15.19■□□□□ 0.02
DDX56-201ENST00000258772 BTG3Q14201 252 aaPredicted RBP15.19■□□□□ 0.02
DDX56-201ENST00000258772 NFE2Q16621 373 aaPredicted RBP15.19■□□□□ 0.02
DDX56-201ENST00000258772 SPPL2CQ8IUH8 684 aa15.19■□□□□ 0.02
DDX56-201ENST00000258772 GPR152Q8TDT2 470 aa15.19■□□□□ 0.02
DDX56-201ENST00000258772 SOCS4Q8WXH5 440 aa15.19■□□□□ 0.02
DDX56-201ENST00000258772 TFAP2CQ92754 450 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms