RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 MTM1Q13496 603 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 IRF4Q15306 451 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 SKIDA1Q1XH10 827 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 MSS51Q4VC12 460 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 TSTD2Q5T7W7 516 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 LAIR1Q6GTX8 287 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 KYAT3Q6YP21 454 aaKnown RBP14.06□□□□□ -0.16
VPS25-201ENST00000253794 GCNT7Q6ZNI0 430 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 RFLNAQ6ZTI6 216 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 RABEPKQ7Z6M1 372 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 TMEM135Q86UB9 458 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 SYT12Q8IV01 421 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 TRAM1L1Q8N609 369 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 OR4K2Q8NGD2 314 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 OR13J1Q8NGT2 312 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 NAT9Q9BTE0 207 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 ZSCAN5AQ9BUG6 496 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 FAM83DQ9H4H8 585 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 IL26Q9NPH9 171 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 MBNL1Q9NR56 388 aaKnown RBP14.06□□□□□ -0.16
VPS25-201ENST00000253794 SUSD2Q9UGT4 822 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 EIF2B4Q9UI10 523 aaKnown RBP14.06□□□□□ -0.16
VPS25-201ENST00000253794 APPL1Q9UKG1 709 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 SMG5Q9UPR3 1016 aaKnown RBP14.06□□□□□ -0.16
VPS25-201ENST00000253794 HCN4Q9Y3Q4 1203 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 KCTD3Q9Y597 815 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 A0A1W2PR77 199 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 AGAP14A8MT82 685 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 PRR5-ARHGAP8B1AHC4 643 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 FPGTO14772 594 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 ITPKAP23677 461 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 TNFRSF8P28908 595 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 PLTPP55058 493 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 PFN3P60673 137 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 YPEL5P62699 121 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 CCDC38Q502W7 563 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 DENND2CQ68D51 928 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 PNCKQ6P2M8 343 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 ADAMTSL4Q6UY14 1074 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 CCNJLQ8IV13 435 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 IFT20Q8IY31 132 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 MPP5Q8N3R9 675 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 DEFB119Q8N690 84 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 MFSD2AQ8NA29 543 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 OR13C4Q8NGS5 318 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 ATOH1Q92858 354 aaPredicted RBP14.05□□□□□ -0.16
VPS25-201ENST00000253794 KLK6Q92876 244 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 SCAMP4Q969E2 229 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 AP2M1Q96CW1 435 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 SERAC1Q96JX3 654 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 DNAJC1Q96KC8 554 aaKnown RBP14.05□□□□□ -0.16
VPS25-201ENST00000253794 BMFQ96LC9 184 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 ZNF778Q96MU6 729 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 VPS35Q96QK1 796 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 EBNA1BP2Q99848 306 aaKnown RBP14.05□□□□□ -0.16
VPS25-201ENST00000253794 RIOK2Q9BVS4 552 aaKnown RBP14.05□□□□□ -0.16
VPS25-201ENST00000253794 TM9SF3Q9HD45 589 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 RRAGDQ9NQL2 400 aaPredicted RBP14.05□□□□□ -0.16
VPS25-201ENST00000253794 CHRAC1Q9NRG0 131 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 SMOXQ9NWM0 555 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 TEX264Q9Y6I9 313 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 SLCO1B1Q9Y6L6 691 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 MYLKQ15746 1914 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 THADAQ6YHU6 1953 aa14.05□□□□□ -0.16
VPS25-201ENST00000253794 GPR179Q6PRD1 2367 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 CEP192Q8TEP8 1941 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 A0A1B0GTW7 788 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 A6NNZ2 444 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 USP1O94782 785 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 TTC4O95801 387 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 RHOXF2BP0C7M4 288 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 PGAM1P18669 254 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 CRADDP78560 199 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 DHX9Q08211 1270 aaKnown RBP14.04□□□□□ -0.16
VPS25-201ENST00000253794 PEX6Q13608 980 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 SEPT6Q14141 434 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 FRG1Q14331 258 aaKnown RBP14.04□□□□□ -0.16
VPS25-201ENST00000253794 PTPRCAPQ14761 206 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 TEX35Q5T0J7 233 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 STEAP4Q687X5 459 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 KIAA0930Q6ICG6 404 aaPredicted RBP14.04□□□□□ -0.16
VPS25-201ENST00000253794 PRR23BQ6ZRT6 265 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 CENPUQ71F23 418 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 ARMCX6Q7L4S7 300 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 DCP2Q8IU60 420 aaKnown RBP14.04□□□□□ -0.16
VPS25-201ENST00000253794 RELL1Q8IUW5 271 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 PELI3Q8N2H9 469 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 PLA2G15Q8NCC3 412 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 CEP76Q8TAP6 659 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 SNX19Q92543 992 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 CDKN2AIPNLQ96HQ2 116 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 SLC6A18Q96N87 628 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 RHOXF2Q9BQY4 288 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 WDR83Q9BRX9 315 aaKnown RBP14.04□□□□□ -0.16
VPS25-201ENST00000253794 TEX101Q9BY14 249 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 TSPYL1Q9H0U9 437 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 ANKZF1Q9H8Y5 726 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 BPIFA1Q9NP55 256 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 FZD3Q9NPG1 666 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 SAMD15Q9P1V8 674 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms