RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 POLD2P49005 469 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 ARSEP51690 589 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 EPHB1P54762 984 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 MAZP56270 477 aaKnown RBP20.99■□□□□ 0.95
NEDD8-201ENST00000250495 CTBSQ01459 385 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 PTSQ03393 145 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 PDK2Q15119 407 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 PTPRRQ15256 657 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 SKOR2Q2VWA4 1001 aaPredicted RBP20.99■□□□□ 0.95
NEDD8-201ENST00000250495 MAP9Q49MG5 647 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 ANKRD20A8PQ5CZ79 823 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 PHF19Q5T6S3 580 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 LRRC66Q68CR7 880 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 SLC30A9Q6PML9 568 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 ADAMTSL4Q6UY14 1074 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 SLITRK4Q8IW52 837 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 MAML1Q92585 1016 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 FATE1Q969F0 183 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 SCARF2Q96GP6 870 aaPredicted RBP20.99■□□□□ 0.95
NEDD8-201ENST00000250495 TSGA13Q96PP4 275 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 RBM22Q9NW64 420 aaKnown RBP eCLIP20.99■□□□□ 0.95
NEDD8-201ENST00000250495 DNPEPQ9ULA0 475 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 GCN1Q92616 2671 aaKnown RBP20.99■□□□□ 0.95
NEDD8-201ENST00000250495 SCN8AQ9UQD0 1980 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 MFSD11O43934 449 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 LIPCP11150 499 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 CA4P22748 312 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 GPR3P46089 330 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 OR1D5P58170 312 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 GSE1Q14687 1217 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 NR1D2Q14995 579 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 AMZ1Q400G9 498 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 ATP13A4Q4VNC1 1196 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 NCBP2-AS2Q69YL0 99 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 ALG1LQ6GMV1 187 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 ZNF765Q7L2R6 523 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 ZNF438Q7Z4V0 828 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 RAVER1Q8IY67 606 aaKnown RBP20.98■□□□□ 0.95
NEDD8-201ENST00000250495 ZNF670Q9BS34 389 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 CDH19Q9H159 772 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 SEMA6CQ9H3T2 930 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 SEPT10Q9P0V9 454 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 CTTNBP2NLQ9P2B4 639 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 UVRAGQ9P2Y5 699 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 CD84Q9UIB8 345 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 LCMT1Q9UIC8 334 aa20.98■□□□□ 0.95
NEDD8-201ENST00000250495 COL6A6A6NMZ7 2263 aa20.97■□□□□ 0.95
NEDD8-201ENST00000250495 PROSCO94903 275 aa20.97■□□□□ 0.95
NEDD8-201ENST00000250495 KRT7P08729 469 aa20.97■□□□□ 0.95
NEDD8-201ENST00000250495 H2AFZP0C0S5 128 aa20.97■□□□□ 0.95
NEDD8-201ENST00000250495 ITIH1P19827 911 aa20.97■□□□□ 0.95
NEDD8-201ENST00000250495 MX2P20592 715 aa20.97■□□□□ 0.95
NEDD8-201ENST00000250495 MAPK10P53779 464 aa20.97■□□□□ 0.95
NEDD8-201ENST00000250495 TMEM164Q5U3C3 297 aa20.97■□□□□ 0.95
NEDD8-201ENST00000250495 KIAA1614Q5VZ46 1190 aa20.97■□□□□ 0.95
NEDD8-201ENST00000250495 DOK6Q6PKX4 331 aa20.97■□□□□ 0.95
NEDD8-201ENST00000250495 USP53Q70EK8 1073 aa20.97■□□□□ 0.95
NEDD8-201ENST00000250495 H2AFVQ71UI9 128 aa20.97■□□□□ 0.95
NEDD8-201ENST00000250495 TMPRSS9Q7Z410 1059 aa20.97■□□□□ 0.95
NEDD8-201ENST00000250495 NRSN1Q8IZ57 195 aa20.97■□□□□ 0.95
NEDD8-201ENST00000250495 USP7Q93009 1102 aa20.97■□□□□ 0.95
NEDD8-201ENST00000250495 B3GNT4Q9C0J1 378 aa20.97■□□□□ 0.95
NEDD8-201ENST00000250495 RDH14Q9HBH5 336 aa20.97■□□□□ 0.95
NEDD8-201ENST00000250495 TTLL3Q9Y4R7 772 aa20.97■□□□□ 0.95
NEDD8-201ENST00000250495 PCDHB11Q9Y5F2 797 aa20.97■□□□□ 0.95
NEDD8-201ENST00000250495 AGRPO00253 132 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 EFSO43281 561 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 SOD1P00441 154 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 GYPCP04921 128 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 PLA2G2AP14555 144 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 GJC1P36383 396 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 ACTR1BP42025 376 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 ACTR1AP61163 376 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 RPL26P61254 145 aaKnown RBP20.96■□□□□ 0.95
NEDD8-201ENST00000250495 DSC2Q02487 901 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 LY6DQ14210 128 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 TGIF1Q15583 401 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 RFLNAQ6ZTI6 216 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 NAGSQ8N159 534 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.96■□□□□ 0.95
NEDD8-201ENST00000250495 EXD1Q8NHP7 514 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 PTCD2Q8WV60 388 aaKnown RBP20.96■□□□□ 0.95
NEDD8-201ENST00000250495 SCAMP4Q969E2 229 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 OR2M4Q96R27 311 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 TDRD1Q9BXT4 1180 aaKnown RBP20.96■□□□□ 0.95
NEDD8-201ENST00000250495 IFNKQ9P0W0 207 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 RPL26L1Q9UNX3 145 aaKnown RBP20.96■□□□□ 0.95
NEDD8-201ENST00000250495 CHKBQ9Y259 395 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 TMEM98Q9Y2Y6 226 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.96■□□□□ 0.953e-9■■□□□ 11.5
NEDD8-201ENST00000250495 ST14Q9Y5Y6 855 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 HELZ2Q9BYK8 2649 aaKnown RBP20.96■□□□□ 0.95
NEDD8-201ENST00000250495 KALRNO60229 2985 aa20.96■□□□□ 0.95
NEDD8-201ENST00000250495 PRAMEF33A0A0G2JMD5 474 aa20.95■□□□□ 0.94
NEDD8-201ENST00000250495 A0A0U1RQS6 177 aa20.95■□□□□ 0.94
NEDD8-201ENST00000250495 HGSO14964 777 aaPredicted RBP20.95■□□□□ 0.94
NEDD8-201ENST00000250495 PRAMEF10O60809 474 aa20.95■□□□□ 0.94
NEDD8-201ENST00000250495 MAP3K6O95382 1288 aa20.95■□□□□ 0.94
NEDD8-201ENST00000250495 CD82P27701 267 aa20.95■□□□□ 0.94
NEDD8-201ENST00000250495 CASP14P31944 242 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms