RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 ATAD1Q8NBU5 361 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 FBXO32Q969P5 355 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 DGCR14Q96DF8 476 aaKnown RBP14.36□□□□□ -0.11
HIF3A-202ENST00000244303 LRCH3Q96II8 777 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 MPP4Q96JB8 637 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 ZFRQ96KR1 1074 aaKnown RBP14.36□□□□□ -0.11
HIF3A-202ENST00000244303 NSUN5Q96P11 429 aaKnown RBP14.36□□□□□ -0.11
HIF3A-202ENST00000244303 MID1IP1Q9NPA3 183 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 PLK2Q9NYY3 685 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 ATXN10Q9UBB4 475 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 CHD5Q8TDI0 1954 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 ANKRD12Q6UB98 2062 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 A0A0J9YYE9 177 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 DRGXA6NNA5 263 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 H3BMM5 538 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 NR5A2O00482 541 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 PIP5K1BO14986 540 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 VILLO15195 856 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 FGF1P05230 155 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 PRSS56P0CW18 603 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 MTHFD2P13995 350 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 PSMC3P17980 439 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 SLC7A1P30825 629 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 PBX3P40426 434 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 IKBKEQ14164 716 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 PARP15Q460N3 678 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 C10orf120Q5SQS8 335 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 HMBOX1Q6NT76 420 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 AMIGO2Q86SJ2 522 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 RIN3Q8TB24 985 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 TWIST2Q8WVJ9 160 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 FEM1CQ96JP0 617 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 ZNF597Q96LX8 424 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 KCNA7Q96RP8 456 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 OCEL1Q9H607 264 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 CATSPERZQ9NTU4 200 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.36□□□□□ -0.11
HIF3A-202ENST00000244303 MARCH2Q9P0N8 246 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 CNOT6Q9ULM6 557 aaKnown RBP14.36□□□□□ -0.11
HIF3A-202ENST00000244303 PCDHB5Q9Y5E4 795 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 SLC12A8A0AV02 714 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 MOXD2PA6NHM9 499 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 RPP40O75818 363 aaKnown RBP14.35□□□□□ -0.11
HIF3A-202ENST00000244303 HLA-DPA1P20036 260 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 SUOXP51687 545 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 APOFQ13790 326 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 ZNF235Q14590 738 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 VARS2Q5ST30 1063 aaKnown RBP14.35□□□□□ -0.11
HIF3A-202ENST00000244303 RAB44Q7Z6P3 723 aaPredicted RBP14.35□□□□□ -0.11
HIF3A-202ENST00000244303 DHFR2Q86XF0 187 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 CHERPQ8IWX8 916 aaKnown RBP14.35□□□□□ -0.11
HIF3A-202ENST00000244303 GPR150Q8NGU9 434 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 PBXIP1Q96AQ6 731 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 ROPN1LQ96C74 230 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 DUS3LQ96G46 650 aaKnown RBP14.35□□□□□ -0.11
HIF3A-202ENST00000244303 FAM193BQ96PV7 902 aaPredicted RBP14.35□□□□□ -0.11
HIF3A-202ENST00000244303 IL1RL2Q9HB29 575 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 ZNF839A8K0R7 811 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 AZIN1O14977 448 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 PYGLP06737 847 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 FGF4P08620 206 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 SPATA31D3P0C874 917 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 CLCN2P51788 898 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 GRB7Q14451 532 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 MAP7D1Q3KQU3 841 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 USP41Q3LFD5 358 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 SPATA31D4Q6ZUB0 917 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 DDIASQ8IXT1 998 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 PCYOX1LQ8NBM8 494 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 OR4L1Q8NH43 312 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 FAM110BQ8TC76 370 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 BRSK1Q8TDC3 778 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 ASB2Q96Q27 587 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 ATOH8Q96SQ7 321 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 SLC29A1Q99808 456 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 CIB1Q99828 191 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 NOL11Q9H8H0 719 aaKnown RBP14.35□□□□□ -0.11
HIF3A-202ENST00000244303 IL37Q9NZH6 218 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 MAP10Q9P2G4 905 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 ACTL7AQ9Y615 435 aa14.35□□□□□ -0.11
HIF3A-202ENST00000244303 A0A1B0GTW7 788 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 BBIP1A8MTZ0 92 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 C9JVG2 144 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 H0YJX3 145 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 PRAMEF11O60813 436 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 TIPRLO75663 272 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 GFAPP14136 432 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 ATP6V1B2P21281 511 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 GRIA3P42263 894 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 STC1P52823 247 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 CREB5Q02930 508 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 TAF10Q12962 218 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 NOGQ13253 232 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 MYLK3Q32MK0 819 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 KANK2Q63ZY3 851 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 KLHDC10Q6PID8 442 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 PHYKPLQ8IUZ5 450 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 RHEBL1Q8TAI7 183 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 CD99L2Q8TCZ2 262 aa14.34□□□□□ -0.11
HIF3A-202ENST00000244303 TRPC4APQ8TEL6 797 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms