RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 HGSO14964 777 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-201ENST00000242776 PPM1DO15297 605 aa13.79□□□□□ -0.2
DDX39A-201ENST00000242776 H2AFZP0C0S5 128 aa13.79□□□□□ -0.2
DDX39A-201ENST00000242776 CCNB1P14635 433 aa13.79□□□□□ -0.2
DDX39A-201ENST00000242776 CSF2RBP32927 897 aa13.79□□□□□ -0.2
DDX39A-201ENST00000242776 MAGEA1P43355 309 aa13.79□□□□□ -0.2
DDX39A-201ENST00000242776 SUOXP51687 545 aa13.79□□□□□ -0.2
DDX39A-201ENST00000242776 LIMK2P53671 638 aa13.79□□□□□ -0.2
DDX39A-201ENST00000242776 GSCP56915 257 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-201ENST00000242776 DOK6Q6PKX4 331 aa13.79□□□□□ -0.2
DDX39A-201ENST00000242776 LIPIQ6XZB0 460 aa13.79□□□□□ -0.2
DDX39A-201ENST00000242776 H2AFVQ71UI9 128 aa13.79□□□□□ -0.2
DDX39A-201ENST00000242776 SLFN11Q7Z7L1 901 aa13.79□□□□□ -0.2
DDX39A-201ENST00000242776 KIAA1328Q86T90 577 aa13.79□□□□□ -0.2
DDX39A-201ENST00000242776 AGBL5Q8NDL9 886 aa13.79□□□□□ -0.2
DDX39A-201ENST00000242776 ZNF653Q96CK0 615 aa13.79□□□□□ -0.2
DDX39A-201ENST00000242776 ABHD17AQ96GS6 310 aa13.79□□□□□ -0.2
DDX39A-201ENST00000242776 KCNF1Q9H3M0 494 aa13.79□□□□□ -0.2
DDX39A-201ENST00000242776 PLEKHM1Q9Y4G2 1056 aa13.79□□□□□ -0.2
DDX39A-201ENST00000242776 SCINQ9Y6U3 715 aa13.79□□□□□ -0.2
DDX39A-201ENST00000242776 LOC101059948A0A1B0GTJ6 334 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 TTC24A2A3L6 582 aaPredicted RBP13.78□□□□□ -0.2
DDX39A-201ENST00000242776 C2CD4BA6NLJ0 364 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 FUCA1P04066 466 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 CCDC175P0C221 793 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 GM2AP17900 193 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 OAS2P29728 719 aaKnown RBP13.78□□□□□ -0.2
DDX39A-201ENST00000242776 POLD2P49005 469 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 MLLT10P55197 1068 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 CDC20Q12834 499 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 ILF3Q12906 894 aaKnown RBP eCLIP13.78□□□□□ -0.2
DDX39A-201ENST00000242776 DCAF12Q5T6F0 453 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 PNCKQ6P2M8 343 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 BRAT1Q6PJG6 821 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 KDELC2Q7Z4H8 507 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 SRLQ86TD4 932 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 HEATR4Q86WZ0 1026 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 TSEN2Q8NCE0 465 aaKnown RBP13.78□□□□□ -0.2
DDX39A-201ENST00000242776 ACRBPQ8NEB7 543 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 GPBAR1Q8TDU6 330 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 ZNF830Q96NB3 372 aaPredicted RBP13.78□□□□□ -0.2
DDX39A-201ENST00000242776 PSMG3-AS1Q96PY0 264 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 GSDMCQ9BYG8 508 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 CDH19Q9H159 772 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 KCNK4Q9NYG8 393 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 TUBD1Q9UJT1 453 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 SUFUQ9UMX1 484 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 PCDHA13Q9Y5I0 950 aa13.78□□□□□ -0.2
DDX39A-201ENST00000242776 MRPS18BQ9Y676 258 aaKnown RBP13.78□□□□□ -0.2
DDX39A-201ENST00000242776 CLEC18AA5D8T8 446 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 PRR19A6NJB7 356 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 TNFRSF10CO14798 259 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 TMEM253P0C7T8 217 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 SERPINA4P29622 427 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 VAV2P52735 878 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 AGERQ15109 404 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 DNAJC24Q6P3W2 148 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 CLEC18BQ6UXF7 455 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 STRADAQ7RTN6 431 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 ZNF438Q7Z4V0 828 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 CLEC18CQ8NCF0 446 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 C3orf20Q8ND61 904 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 KIAA1143Q96AT1 154 aaPredicted RBP13.77□□□□□ -0.21
DDX39A-201ENST00000242776 ZNF641Q96N77 438 aaPredicted RBP13.77□□□□□ -0.21
DDX39A-201ENST00000242776 CATSPER2Q96P56 530 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 DESI2Q9BSY9 194 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 SELENOOQ9BVL4 669 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 B3GNT4Q9C0J1 378 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 ATP13A3Q9H7F0 1226 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 MRPL47Q9HD33 250 aaKnown RBP13.77□□□□□ -0.21
DDX39A-201ENST00000242776 CNOT8Q9UFF9 292 aaKnown RBP13.77□□□□□ -0.21
DDX39A-201ENST00000242776 TP53TG5Q9Y2B4 290 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 PCDHGA3Q9Y5H0 932 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 ST14Q9Y5Y6 855 aa13.77□□□□□ -0.21
DDX39A-201ENST00000242776 IGHV1OR21-1A0A087WYE8 117 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 K7EM74 188 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 ZW10O43264 779 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 CCP110O43303 1012 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 CEACAM5P06731 702 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 KRT7P08729 469 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 THRAP10827 490 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 GPD1P21695 349 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 RFC1P35251 1148 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-201ENST00000242776 YBEYP58557 167 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-201ENST00000242776 CTBSQ01459 385 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 BCL2L1Q07817 233 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 PTP4A2Q12974 167 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 GRM3Q14832 879 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 PARP15Q460N3 678 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 LACTB2Q53H82 288 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-201ENST00000242776 ARCQ7LC44 396 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 RHOT2Q8IXI1 618 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 NLGN4XQ8N0W4 816 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 NAGSQ8N159 534 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 NLGN4YQ8NFZ3 816 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-201ENST00000242776 OR4D9Q8NGE8 314 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 HCAR2Q8TDS4 363 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 FNIP1Q8TF40 1166 aa13.76□□□□□ -0.21
DDX39A-201ENST00000242776 PDCD6IPQ8WUM4 868 aaKnown RBP13.76□□□□□ -0.21
DDX39A-201ENST00000242776 NUS1Q96E22 293 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms