RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 UCMAQ8WVF2 138 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 STON2Q8WXE9 905 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 PEX13Q92968 403 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 HMCESQ96FZ2 354 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 PCED1AQ9H1Q7 454 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 CENPHQ9H3R5 247 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 CAAP1Q9H8G2 361 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 CLK4Q9HAZ1 481 aaKnown RBP9.36□□□□□ -0.91
TGFB3-201ENST00000238682 PARVBQ9HBI1 364 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 GLOD4Q9HC38 313 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 ATP13A1Q9HD20 1204 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 MPP6Q9NZW5 540 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 MMP17Q9ULZ9 603 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 HS3ST2Q9Y278 367 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 SNX10Q9Y5X0 201 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 COL4A3Q01955 1670 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 NCOR1O75376 2440 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 MAGEB16A2A368 324 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 HTR3EA5X5Y0 456 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 DFFAO00273 331 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 CYP17A1P05093 508 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 ATP5BP06576 529 aaKnown RBP9.36□□□□□ -0.91
TGFB3-201ENST00000238682 PABPC1P11940 636 aaKnown RBP9.36□□□□□ -0.91
TGFB3-201ENST00000238682 VAV1P15498 845 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 MMP13P45452 471 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 SUOXP51687 545 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 USP39Q53GS9 565 aaKnown RBP9.36□□□□□ -0.91
TGFB3-201ENST00000238682 IZUMO3Q5VZ72 239 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 RNF219Q5W0B1 726 aaPredicted RBP9.36□□□□□ -0.91
TGFB3-201ENST00000238682 NEK10Q6ZWH5 1172 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 CYS1Q717R9 158 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 TRMT10CQ7L0Y3 403 aaKnown RBP9.36□□□□□ -0.91
TGFB3-201ENST00000238682 CARNMT1Q8N4J0 409 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 FAM71DQ8N9W8 422 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 SCG3Q8WXD2 468 aaKnown RBP9.36□□□□□ -0.91
TGFB3-201ENST00000238682 ALKBH8Q96BT7 664 aaKnown RBP9.36□□□□□ -0.91
TGFB3-201ENST00000238682 NUDCD1Q96RS6 583 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 BBS2Q9BXC9 721 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 ZNF304Q9HCX3 659 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 KLHL8Q9P2G9 620 aaPredicted RBP9.36□□□□□ -0.91
TGFB3-201ENST00000238682 RIMKLBQ9ULI2 386 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 MFHAS1Q9Y4C4 1052 aa9.36□□□□□ -0.91
TGFB3-201ENST00000238682 MYO7AQ13402 2215 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 E7ESA3 106 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 ATP6V1G2O95670 118 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 AP2A1O95782 977 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 GSTA1P08263 222 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 TYRP14679 529 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 MAPK9P45984 424 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 NPY2RP49146 381 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 CLCN2P51788 898 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 ARL4CP56559 192 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 RPS24P62847 133 aaKnown RBP9.35□□□□□ -0.91
TGFB3-201ENST00000238682 GPS1Q13098 491 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 SKIDA1Q1XH10 827 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 GRAMD4Q6IC98 578 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 RFWD3Q6PCD5 774 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 UNC5DQ6UXZ4 953 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 BPHLQ86WA6 291 aaPredicted RBP9.35□□□□□ -0.91
TGFB3-201ENST00000238682 LSMEM2Q8N112 164 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 ZNF567Q8N184 647 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 PDCD7Q8N8D1 485 aaKnown RBP9.35□□□□□ -0.91
TGFB3-201ENST00000238682 NCSTNQ92542 709 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 WBP2Q969T9 261 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 ITPKCQ96DU7 683 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 IMP4Q96G21 291 aaKnown RBP9.35□□□□□ -0.91
TGFB3-201ENST00000238682 LRGUKQ96M69 825 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 LRRC3BQ96PB8 259 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 NDNQ99608 321 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 ELAC2Q9BQ52 826 aaKnown RBP9.35□□□□□ -0.91
TGFB3-201ENST00000238682 SLC7A5P2Q9GIP4 190 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 MRM3Q9HC36 420 aaKnown RBP9.35□□□□□ -0.91
TGFB3-201ENST00000238682 PREBQ9HCU5 417 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 NDUFA13Q9P0J0 144 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 CCL26Q9Y258 94 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 STARD13Q9Y3M8 1113 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 PCDHGA11Q9Y5H2 935 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 UPK3BL1B0FP48 263 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 UPK3BL2E5RIL1 263 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 TOR1BO14657 336 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 SOCS5O75159 536 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 CISD3P0C7P0 127 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 CCND1P24385 295 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 NNMTP40261 264 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 FNTBP49356 437 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 VPS41P49754 854 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 SERPINH1P50454 418 aaKnown RBP9.35□□□□□ -0.91
TGFB3-201ENST00000238682 COX10Q12887 443 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 ZNF235Q14590 738 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 PITRM1Q5JRX3 1037 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 LRRC8BQ6P9F7 803 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 PRR23CQ6ZRP0 262 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 C3orf62Q6ZUJ4 267 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 CENPUQ71F23 418 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 ZFPM2Q8WW38 1151 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 MFSD3Q96ES6 412 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 VMP1Q96GC9 406 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 FEM1CQ96JP0 617 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 RANBP9Q96S59 729 aa9.35□□□□□ -0.91
TGFB3-201ENST00000238682 CCT7Q99832 543 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms