RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 NOL11Q9H8H0 719 aaKnown RBP11.1□□□□□ -0.63
MSH6-201ENST00000234420 TMPRSS4Q9NRS4 437 aa11.1□□□□□ -0.63
MSH6-201ENST00000234420 SPATA6Q9NWH7 488 aaPredicted RBP11.1□□□□□ -0.63
MSH6-201ENST00000234420 FARSAQ9Y285 508 aaKnown RBP11.1□□□□□ -0.63
MSH6-201ENST00000234420 A0A088AWK7 358 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 RAMP2O60895 175 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 ZNF10P21506 573 aaPredicted RBP11.09□□□□□ -0.63
MSH6-201ENST00000234420 GABRR2P28476 465 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 DDR1Q08345 913 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 EPHA7Q15375 998 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 TKFCQ3LXA3 575 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 LRRC73Q5JTD7 316 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 CDKL4Q5MAI5 379 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 ELMOD2Q8IZ81 293 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 ACTRT1Q8TDG2 376 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 TUBG2Q9NRH3 451 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 AASSQ9UDR5 926 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 SAMHD1Q9Y3Z3 626 aaKnown RBP11.09□□□□□ -0.63
MSH6-201ENST00000234420 ZBTB14O43829 449 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 NR2F6P10588 404 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 ATXN1P54253 815 aaKnown RBP11.09□□□□□ -0.63
MSH6-201ENST00000234420 GEMP55040 296 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 POLR2LP62875 67 aaKnown RBP11.09□□□□□ -0.63
MSH6-201ENST00000234420 SPIBQ01892 262 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 PPIL2Q13356 520 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 SNAPC1Q16533 368 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 PAPD7Q5XG87 772 aaKnown RBP11.09□□□□□ -0.63
MSH6-201ENST00000234420 NCCRP1Q6ZVX7 275 aaPredicted RBP11.09□□□□□ -0.63
MSH6-201ENST00000234420 FBXO39Q8N4B4 442 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 BOLLQ8N9W6 283 aaKnown RBP11.09□□□□□ -0.63
MSH6-201ENST00000234420 TCF12Q99081 682 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 ZCCHC2Q9C0B9 1178 aaKnown RBP11.09□□□□□ -0.63
MSH6-201ENST00000234420 BTBD19C9JJ37 291 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 EPHX1P07099 455 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 ECT2LQ008S8 904 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 CNPY1Q3B7I2 92 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 CCNJLQ8IV13 435 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 TMEM151BQ8IW70 566 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 ZNF567Q8N184 647 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 TSEN2Q8NCE0 465 aaKnown RBP11.09□□□□□ -0.63
MSH6-201ENST00000234420 SPAG4Q9NPE6 437 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 AAR2Q9Y312 384 aaKnown RBP11.09□□□□□ -0.63
MSH6-201ENST00000234420 PTCH1Q13635 1447 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 KANTRA0A1W2PQU2 76 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 MLLT6P55198 1093 aaPredicted RBP11.09□□□□□ -0.63
MSH6-201ENST00000234420 IL27RAQ6UWB1 636 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 C10orf107Q8IVU9 208 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 GHDCQ8N2G8 530 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 NCAPD2Q15021 1401 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 RPTORQ8N122 1335 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 KIAA0391O15091 583 aaKnown RBP11.09□□□□□ -0.63
MSH6-201ENST00000234420 RGS14O43566 566 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 YES1P07947 543 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 RBM20Q5T481 1227 aaKnown RBP11.09□□□□□ -0.63
MSH6-201ENST00000234420 KLHDC7AQ5VTJ3 777 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 CLIP4Q8N3C7 705 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 HCAR2Q8TDS4 363 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 GAL3ST1Q99999 423 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 FBXO44Q9H4M3 255 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 DHRS12A0PJE2 317 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 BHMG1C9JSJ3 638 aaPredicted RBP11.09□□□□□ -0.63
MSH6-201ENST00000234420 EYA4O95677 639 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 CDH4P55283 916 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 XKR4Q5GH76 650 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 SRFBP1Q8NEF9 429 aaKnown RBP11.09□□□□□ -0.63
MSH6-201ENST00000234420 OR5J2Q8NH18 312 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 ZCCHC10Q8TBK6 192 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 C5orf34Q96MH7 638 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 GAD1Q99259 594 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 IL12RB2Q99665 862 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 MTMR4Q9NYA4 1195 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 PSMD13Q9UNM6 376 aa11.09□□□□□ -0.63
MSH6-201ENST00000234420 ISPDA4D126 451 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 A6NCN8 305 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 ABLIM1O14639 778 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 SSX5O60225 188 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 AOC2O75106 756 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 INSRRP14616 1297 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 CSTF2P33240 577 aaKnown RBP eCLIP11.08□□□□□ -0.642e-8■■■■□ 23.8
MSH6-201ENST00000234420 C1QBPQ07021 282 aaKnown RBP11.08□□□□□ -0.64
MSH6-201ENST00000234420 FAAP100Q0VG06 881 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 TMPRSS11AQ6ZMR5 421 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 FAM92BQ6ZTR7 304 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 INO80EQ8NBZ0 244 aaPredicted RBP11.08□□□□□ -0.64
MSH6-201ENST00000234420 GSTCDQ8NEC7 633 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 OR2L3Q8NG85 312 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 ZNF649Q9BS31 505 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 METP08581 1390 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 TMEM150BA6NC51 233 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 C5orf51A6NDU8 294 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 H0YJX3 145 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 PDLIM1O00151 329 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 CACNB4O00305 520 aaPredicted RBP11.08□□□□□ -0.64
MSH6-201ENST00000234420 EPHB6O15197 1021 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 ERAL1O75616 437 aaKnown RBP11.08□□□□□ -0.64
MSH6-201ENST00000234420 PIGNO95427 931 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 CCR1P32246 355 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 FSTL1Q12841 308 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 VMACQ2NL98 169 aa11.08□□□□□ -0.64
MSH6-201ENST00000234420 BRMS1LQ5PSV4 323 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms