RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 RAP1GAP2Q684P5 730 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 MRNIPQ6NTE8 343 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 RAB44Q7Z6P3 723 aaPredicted RBP16.25■□□□□ 0.19
LTBR-201ENST00000228918 MIER2Q8N344 545 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 ATP6V0D2Q8N8Y2 350 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 TSPAN14Q8NG11 270 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 RHEBL1Q8TAI7 183 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 FAM110BQ8TC76 370 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 BLOC1S5Q8TDH9 187 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 SOCS4Q8WXH5 440 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 ZUFSPQ96AP4 578 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 PPWD1Q96BP3 646 aaKnown RBP16.25■□□□□ 0.19
LTBR-201ENST00000228918 FEM1CQ96JP0 617 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 ATOH8Q96SQ7 321 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 SEMA3CQ99985 751 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 HOPXQ9BPY8 73 aaPredicted RBP16.25■□□□□ 0.19
LTBR-201ENST00000228918 FBXO44Q9H4M3 255 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 GMEB1Q9Y692 573 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 GBF1Q92538 1859 aa16.25■□□□□ 0.19
LTBR-201ENST00000228918 H3BMM5 538 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 FXYD1O00168 92 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 RAMP2O60895 175 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 RPP40O75818 363 aaKnown RBP16.24■□□□□ 0.19
LTBR-201ENST00000228918 H6PDO95479 791 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 BMP2P12643 396 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 CKMT2P17540 419 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 HLA-DPA1P20036 260 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 GRB7Q14451 532 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 GEN1Q17RS7 908 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 TMEM259Q4ZIN3 620 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 PPP4R4Q6NUP7 873 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 PRMT9Q6P2P2 845 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 BTN2A3PQ96KV6 586 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 C8orf48Q96LL4 319 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 NSUN5Q96P11 429 aaKnown RBP16.24■□□□□ 0.19
LTBR-201ENST00000228918 PLEKHG4BQ96PX9 1271 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 ANKRD60Q9BZ19 345 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 POLR1EQ9GZS1 481 aaKnown RBP16.24■□□□□ 0.19
LTBR-201ENST00000228918 PNPLA3Q9NST1 481 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 DUS2Q9NX74 493 aaKnown RBP16.24■□□□□ 0.19
LTBR-201ENST00000228918 CEPT1Q9Y6K0 416 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 TTC36A6NLP5 189 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 H3BNH8 94 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 MUSKO15146 869 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 CELF2O95319 508 aaKnown RBP16.24■□□□□ 0.19
LTBR-201ENST00000228918 OGNP20774 298 aaKnown RBP16.24■□□□□ 0.19
LTBR-201ENST00000228918 ATP6V0D1P61421 351 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 PRKCQQ04759 706 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 SERINC3Q13530 473 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 POLD3Q15054 466 aaPredicted RBP16.24■□□□□ 0.19
LTBR-201ENST00000228918 PFKFB4Q16877 469 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 PARP15Q460N3 678 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 ZBTB49Q6ZSB9 765 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 ZNF598Q86UK7 904 aaKnown RBP16.24■□□□□ 0.19
LTBR-201ENST00000228918 CIR1Q86X95 450 aaPredicted RBP16.24■□□□□ 0.19
LTBR-201ENST00000228918 OR13C4Q8NGS5 318 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 FUBP3Q96I24 572 aaKnown RBP eCLIP16.24■□□□□ 0.19
LTBR-201ENST00000228918 KCNA7Q96RP8 456 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 TCF12Q99081 682 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 CCT7Q99832 543 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 SYT17Q9BSW7 474 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 AARSD1Q9BTE6 412 aaKnown RBP16.24■□□□□ 0.19
LTBR-201ENST00000228918 TUBB1Q9H4B7 451 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 TFB2MQ9H5Q4 396 aaKnown RBP16.24■□□□□ 0.19
LTBR-201ENST00000228918 IL1RL2Q9HB29 575 aa16.24■□□□□ 0.19
LTBR-201ENST00000228918 CCM2LQ9NUG4 571 aaPredicted RBP16.24■□□□□ 0.19
LTBR-201ENST00000228918 AQP12BA6NM10 295 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 SOCS2O14508 198 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 INPPL1O15357 1258 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 AKAP10O43572 662 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 MATN4O95460 622 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 HSD17B1P14061 328 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 GRK4P32298 578 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 PBX3P40426 434 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 SCNN1BP51168 640 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 GALNT3Q14435 633 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 TRIP4Q15650 581 aaPredicted RBP16.23■□□□□ 0.19
LTBR-201ENST00000228918 VPS26BQ4G0F5 336 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 NHSL2Q5HYW2 709 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 KRT80Q6KB66 452 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 AQP12AQ8IXF9 295 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 DDIASQ8IXT1 998 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 SLC15A3Q8IY34 581 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 DCP1BQ8IZD4 617 aaKnown RBP16.23■□□□□ 0.19
LTBR-201ENST00000228918 MINDY1Q8N5J2 469 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 ZNF512Q96ME7 567 aaPredicted RBP16.23■□□□□ 0.19
LTBR-201ENST00000228918 CATSPERZQ9NTU4 200 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 OLAHQ9NV23 265 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 THEGQ9P2T0 379 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 MYRFQ9Y2G1 1151 aa16.23■□□□□ 0.19
LTBR-201ENST00000228918 DRGXA6NNA5 263 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 PLOD2O00469 737 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 ANGPT2O15123 496 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 TMCC1O94876 653 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 OAZ2O95190 189 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 TBX18O95935 607 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 NELFEP18615 380 aaKnown RBP16.22■□□□□ 0.19
LTBR-201ENST00000228918 CDH2P19022 906 aaPredicted RBP16.22■□□□□ 0.19
LTBR-201ENST00000228918 SLC5A2P31639 672 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 ACVRL1P37023 503 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms