RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 LDB1Q86U70 411 aaPredicted RBP17.46■□□□□ 0.39
PRPF19-201ENST00000227524 CMTR2Q8IYT2 770 aaKnown RBP17.46■□□□□ 0.39
PRPF19-201ENST00000227524 MIER2Q8N344 545 aa17.46■□□□□ 0.39
PRPF19-201ENST00000227524 C3orf58Q8NDZ4 430 aa17.46■□□□□ 0.39
PRPF19-201ENST00000227524 EXT2Q93063 718 aa17.46■□□□□ 0.39
PRPF19-201ENST00000227524 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.46■□□□□ 0.39
PRPF19-201ENST00000227524 CENPNQ96H22 339 aaPredicted RBP17.46■□□□□ 0.39
PRPF19-201ENST00000227524 MYRFLQ96LU7 910 aa17.46■□□□□ 0.39
PRPF19-201ENST00000227524 CFHR5Q9BXR6 569 aa17.46■□□□□ 0.39
PRPF19-201ENST00000227524 MUC3BQ9H195 1237 aa17.46■□□□□ 0.39
PRPF19-201ENST00000227524 HIPK3Q9H422 1215 aa17.46■□□□□ 0.39
PRPF19-201ENST00000227524 AGO3Q9H9G7 860 aaKnown RBP17.46■□□□□ 0.39
PRPF19-201ENST00000227524 SRRDQ9UH36 339 aa17.46■□□□□ 0.39
PRPF19-201ENST00000227524 CDH7Q9ULB5 785 aa17.46■□□□□ 0.39
PRPF19-201ENST00000227524 PATJQ8NI35 1801 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 PIP5K1BO14986 540 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 ARPC2O15144 300 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 SEC24DO94855 1032 aaPredicted RBP17.45■□□□□ 0.38
PRPF19-201ENST00000227524 SLC26A3P40879 764 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 CCT8P50990 548 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 PHYKPLQ8IUZ5 450 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 LRRC43Q8N309 656 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 CD99L2Q8TCZ2 262 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 SH3RF2Q8TEC5 729 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 TWIST2Q8WVJ9 160 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 FCRL2Q96LA5 508 aaPredicted RBP17.45■□□□□ 0.38
PRPF19-201ENST00000227524 DCUN1D5Q9BTE7 237 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 SLC25A51Q9H1U9 297 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 DSEQ9UL01 958 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 ZNF510Q9Y2H8 683 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 RNF103-CHMP3A0A140T963 221 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 C9JVG2 144 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 CCL22O00626 93 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 CDK14O94921 469 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 RASAL1O95294 804 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 PAPSS2O95340 614 aaPredicted RBP17.45■□□□□ 0.38
PRPF19-201ENST00000227524 S1PR4O95977 384 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 BDNFP23560 247 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 YBX1P67809 324 aaKnown RBP17.45■□□□□ 0.38
PRPF19-201ENST00000227524 ELMSAN1Q6PJG2 1045 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 SNRNP27Q8WVK2 155 aaKnown RBP17.45■□□□□ 0.38
PRPF19-201ENST00000227524 CYGBQ8WWM9 190 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 SEPT8Q92599 483 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 FBXL20Q96IG2 436 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 RTP3Q9BQQ7 232 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 MFSD1Q9H3U5 465 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 SLC38A7Q9NVC3 462 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 POLR3BQ9NW08 1133 aaPredicted RBP17.45■□□□□ 0.38
PRPF19-201ENST00000227524 GID8Q9NWU2 228 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 OAZ3Q9UMX2 235 aa17.45■□□□□ 0.38
PRPF19-201ENST00000227524 ZFC3H1O60293 1989 aaKnown RBP17.44■□□□□ 0.38
PRPF19-201ENST00000227524 TTC24A2A3L6 582 aaPredicted RBP17.44■□□□□ 0.38
PRPF19-201ENST00000227524 M0QZ92 97 aa17.44■□□□□ 0.38
PRPF19-201ENST00000227524 ACOX3O15254 700 aa17.44■□□□□ 0.38
PRPF19-201ENST00000227524 SLC7A4O43246 635 aa17.44■□□□□ 0.38
PRPF19-201ENST00000227524 MSI1O43347 362 aaKnown RBP17.44■□□□□ 0.38
PRPF19-201ENST00000227524 GFAPP14136 432 aa17.44■□□□□ 0.38
PRPF19-201ENST00000227524 SLC6A2P23975 617 aa17.44■□□□□ 0.38
PRPF19-201ENST00000227524 PCSK1P29120 753 aa17.44■□□□□ 0.38
PRPF19-201ENST00000227524 AFF1P51825 1210 aaKnown RBP17.44■□□□□ 0.38
PRPF19-201ENST00000227524 C16orf72Q14CZ0 275 aa17.44■□□□□ 0.38
PRPF19-201ENST00000227524 Q6ZNX1 250 aa17.44■□□□□ 0.38
PRPF19-201ENST00000227524 LYSMD3Q7Z3D4 306 aa17.44■□□□□ 0.38
PRPF19-201ENST00000227524 SCML4Q8N228 414 aa17.44■□□□□ 0.38
PRPF19-201ENST00000227524 PTGR2Q8N8N7 351 aaPredicted RBP17.44■□□□□ 0.38
PRPF19-201ENST00000227524 RTL3Q8N8U3 475 aaKnown RBP17.44■□□□□ 0.38
PRPF19-201ENST00000227524 OR6P1Q8NGX9 317 aa17.44■□□□□ 0.38
PRPF19-201ENST00000227524 MID1IP1Q9NPA3 183 aa17.44■□□□□ 0.38
PRPF19-201ENST00000227524 FAIMQ9NVQ4 179 aa17.44■□□□□ 0.38
PRPF19-201ENST00000227524 TBCCD1Q9NVR7 557 aa17.44■□□□□ 0.38
PRPF19-201ENST00000227524 OSER1Q9NX31 292 aa17.44■□□□□ 0.38
PRPF19-201ENST00000227524 MARCH4Q9P2E8 410 aaPredicted RBP17.44■□□□□ 0.38
PRPF19-201ENST00000227524 PPP6CO00743 305 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 AZIN1O14977 448 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 ZSCAN9O15535 394 aaPredicted RBP17.43■□□□□ 0.38
PRPF19-201ENST00000227524 ATE1O95260 518 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 MATN4O95460 622 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 HNRNPCP07910 306 aaKnown RBP eCLIP17.43■□□□□ 0.38
PRPF19-201ENST00000227524 FGF4P08620 206 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 C7P10643 843 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 CD1DP15813 335 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 CHRM3P20309 590 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 ARSDP51689 593 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 FOXA1P55317 472 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 TMTC4Q5T4D3 741 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 KANK2Q63ZY3 851 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 SMYD1Q8NB12 490 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 TRPV3Q8NET8 790 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 OR52K2Q8NGK3 314 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 HDAC10Q969S8 669 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 LRRC58Q96CX6 371 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 IMP4Q96G21 291 aaKnown RBP17.43■□□□□ 0.38
PRPF19-201ENST00000227524 ASB2Q96Q27 587 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 TRIM62Q9BVG3 475 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 CXorf21Q9HAI6 301 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 CD320Q9NPF0 282 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 RGS18Q9NS28 235 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 MPP6Q9NZW5 540 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 PTPRDP23468 1912 aa17.43■□□□□ 0.38
PRPF19-201ENST00000227524 OR51F1A6NGY5 319 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms