RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 POTEHQ6S545 545 aa10.54□□□□□ -0.72
TRPS1-201ENST00000220888 C15orf52Q6ZUT6 534 aaKnown RBP10.54□□□□□ -0.72
TRPS1-201ENST00000220888 ZCCHC7Q8N3Z6 543 aaKnown RBP10.54□□□□□ -0.72
TRPS1-201ENST00000220888 OR52K2Q8NGK3 314 aa10.54□□□□□ -0.72
TRPS1-201ENST00000220888 ZCCHC10Q8TBK6 192 aa10.54□□□□□ -0.72
TRPS1-201ENST00000220888 PLEKHA1Q9HB21 404 aa10.54□□□□□ -0.72
TRPS1-201ENST00000220888 NMUR1Q9HB89 426 aa10.54□□□□□ -0.72
TRPS1-201ENST00000220888 OSER1Q9NX31 292 aa10.54□□□□□ -0.72
TRPS1-201ENST00000220888 GPC6Q9Y625 555 aaPredicted RBP10.54□□□□□ -0.72
TRPS1-201ENST00000220888 FFAR2O15552 330 aa10.54□□□□□ -0.72
TRPS1-201ENST00000220888 ASLP04424 464 aa10.54□□□□□ -0.72
TRPS1-201ENST00000220888 RTP1P59025 263 aa10.54□□□□□ -0.72
TRPS1-201ENST00000220888 SLC20A2Q08357 652 aa10.54□□□□□ -0.72
TRPS1-201ENST00000220888 MYBPC3Q14896 1274 aa10.54□□□□□ -0.72
TRPS1-201ENST00000220888 INTS6LQ5JSJ4 861 aaKnown RBP10.54□□□□□ -0.72
TRPS1-201ENST00000220888 C16orf46Q6P387 395 aa10.54□□□□□ -0.72
TRPS1-201ENST00000220888 SCIMPQ6UWF3 145 aa10.54□□□□□ -0.72
TRPS1-201ENST00000220888 MAGEE2Q8TD90 523 aaPredicted RBP10.54□□□□□ -0.72
TRPS1-201ENST00000220888 DCLRE1BQ9H816 532 aa10.54□□□□□ -0.72
TRPS1-201ENST00000220888 DNAJC28Q9NX36 388 aa10.54□□□□□ -0.72
TRPS1-201ENST00000220888 FBXO5Q9UKT4 447 aa10.54□□□□□ -0.72
TRPS1-201ENST00000220888 IKZF3Q9UKT9 509 aa10.54□□□□□ -0.72
TRPS1-201ENST00000220888 DMTF1Q9Y222 760 aa10.54□□□□□ -0.72
TRPS1-201ENST00000220888 ERGIC3Q9Y282 383 aa10.54□□□□□ -0.72
TRPS1-201ENST00000220888 QRICH2Q9H0J4 1663 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 A0A1B0GVM2 712 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 TCAF2A6NFQ2 919 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 KLK3P07288 261 aaPredicted RBP10.53□□□□□ -0.72
TRPS1-201ENST00000220888 ADRB2P07550 413 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 SAGP10523 405 aaPredicted RBP10.53□□□□□ -0.72
TRPS1-201ENST00000220888 PIM1P11309 404 aaPredicted RBP10.53□□□□□ -0.72
TRPS1-201ENST00000220888 ALDH4A1P30038 563 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 GDI2P50395 445 aaKnown RBP10.53□□□□□ -0.72
TRPS1-201ENST00000220888 ATXN1P54253 815 aaKnown RBP10.53□□□□□ -0.72
TRPS1-201ENST00000220888 ARF5P84085 180 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 PPP3CAQ08209 521 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 SLC13A2Q13183 592 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 SQLEQ14534 574 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 WDR45BQ5MNZ6 344 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 CTU1Q7Z7A3 348 aaKnown RBP10.53□□□□□ -0.72
TRPS1-201ENST00000220888 C12orf29Q8N999 325 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 DBF4BQ8NFT6 615 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 MIEF2Q96C03 454 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 NUAK2Q9H093 628 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 CRISPLD1Q9H336 500 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 AGO3Q9H9G7 860 aaKnown RBP10.53□□□□□ -0.72
TRPS1-201ENST00000220888 IRAK3Q9Y616 596 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 SCAMP1O15126 338 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 ZNF208O43345 1280 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 TM7SF2O76062 418 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 EOMESO95936 686 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 SLC5A3P53794 718 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 PDGFRLQ15198 375 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 FRMPD1Q5SYB0 1578 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 ZBTB2Q8N680 514 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 POU5F2Q8N7G0 328 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.53□□□□□ -0.72
TRPS1-201ENST00000220888 OR6Y1Q8NGX8 325 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 ETNPPLQ8TBG4 499 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 SHC3Q92529 594 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 GOLGA2P5Q9HBQ8 144 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 MTF2Q9Y483 593 aaPredicted RBP10.53□□□□□ -0.72
TRPS1-201ENST00000220888 PCDHGB5Q9Y5G0 923 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 UGT2B17O75795 530 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 CCNB2O95067 398 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 SERPINA1P01009 418 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 CHRNGP07510 517 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 ALOX12P18054 663 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 CSTF2P33240 577 aaKnown RBP eCLIP10.53□□□□□ -0.72
TRPS1-201ENST00000220888 TIE1P35590 1138 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 CDH4P55283 916 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 MRPS22P82650 360 aaKnown RBP10.53□□□□□ -0.72
TRPS1-201ENST00000220888 PRKG2Q13237 762 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 SMCO1Q147U7 214 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 NEDD8Q15843 81 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 DGUOKQ16854 277 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 EOGTQ5NDL2 527 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 RFWD3Q6PCD5 774 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 C8orf59Q8N0T1 100 aaPredicted RBP10.53□□□□□ -0.72
TRPS1-201ENST00000220888 QKIQ96PU8 341 aaKnown RBP eCLIP10.53□□□□□ -0.722e-7■■■■■ 32.9
TRPS1-201ENST00000220888 COQ7Q99807 217 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 PCDHA2Q9Y5H9 948 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 LOC102724159A0A0B4J2E5 919 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 C5orf60A6NFR6 353 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 DDX3XO00571 662 aaKnown RBP eCLIP10.53□□□□□ -0.72
TRPS1-201ENST00000220888 TRBC1P01850 177 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 RPL22P35268 128 aaKnown RBP10.53□□□□□ -0.72
TRPS1-201ENST00000220888 TGFBR2P37173 567 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 RAB25P57735 213 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 PWP2Q15269 919 aaKnown RBP10.53□□□□□ -0.72
TRPS1-201ENST00000220888 ZCCHC12Q6PEW1 402 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 IZUMO2Q6UXV1 221 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 ARMCX6Q7L4S7 300 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 NUP54Q7Z3B4 507 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 ZCCHC9Q8N567 271 aaKnown RBP10.53□□□□□ -0.72
TRPS1-201ENST00000220888 C2orf15Q8WU43 125 aaKnown RBP10.53□□□□□ -0.72
TRPS1-201ENST00000220888 RNF31Q96EP0 1072 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 SIPA1Q96FS4 1042 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 SCLYQ96I15 445 aa10.53□□□□□ -0.72
TRPS1-201ENST00000220888 OR52E6Q96RD3 313 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms