RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 FBXO8Q9NRD0 319 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 GPATCH2LQ9NWQ4 482 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 PAQR5Q9NXK6 330 aaPredicted RBP13.63□□□□□ -0.23
GABPB1-201ENST00000220429 ATP6V1HQ9UI12 483 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 HCN4Q9Y3Q4 1203 aa13.63□□□□□ -0.23
GABPB1-201ENST00000220429 OR7A10O76100 309 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 MBL2P11226 248 aaPredicted RBP13.62□□□□□ -0.23
GABPB1-201ENST00000220429 EEF1B2P24534 225 aaKnown RBP13.62□□□□□ -0.23
GABPB1-201ENST00000220429 GSTM2P28161 218 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 CD40LGP29965 261 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 GRIA1P42261 906 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 POLD2P49005 469 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 SLC6A3Q01959 620 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 PPP1R3AQ16821 1122 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 CHSY3Q70JA7 882 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 PTAR1Q7Z6K3 402 aaPredicted RBP13.62□□□□□ -0.23
GABPB1-201ENST00000220429 SCML4Q8N228 414 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 TP53I13Q8NBR0 393 aaPredicted RBP13.62□□□□□ -0.23
GABPB1-201ENST00000220429 OR6B3Q8NGW1 331 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 DNAJB3Q8WWF6 145 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 NGRNQ9NPE2 291 aaKnown RBP13.62□□□□□ -0.23
GABPB1-201ENST00000220429 IGSF5Q9NSI5 407 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 FLRT1Q9NZU1 646 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 NDST3O95803 873 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 HLCSP50747 726 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 SRP54P61011 504 aaKnown RBP13.62□□□□□ -0.23
GABPB1-201ENST00000220429 CDC42EP1Q00587 391 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 MERTKQ12866 999 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 MTM1Q13496 603 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 GALNT3Q14435 633 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 VWA5B1Q5TIE3 1220 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 AGAP6Q5VW22 663 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 DESI1Q6ICB0 168 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 SCYL2Q6P3W7 929 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 CRTC3Q6UUV7 619 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 MFSD2AQ8NA29 543 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 POC5Q8NA72 575 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 MAGED4Q96JG8 741 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 CEP19Q96LK0 163 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 AGAP4Q96P64 663 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 RNF157Q96PX1 679 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 TNFRSF10DQ9UBN6 386 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 CPA4Q9UI42 421 aa13.62□□□□□ -0.23
GABPB1-201ENST00000220429 E7ESA3 106 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 ATF6P18850 670 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 TCN1P20061 433 aaPredicted RBP13.61□□□□□ -0.23
GABPB1-201ENST00000220429 KRT20P35900 424 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 FKBP1BP68106 108 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 ROR1Q01973 937 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 TFDP2Q14188 446 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 MFSD10Q14728 455 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 TTC39BQ5VTQ0 682 aaPredicted RBP13.61□□□□□ -0.23
GABPB1-201ENST00000220429 DARS2Q6PI48 645 aaKnown RBP13.61□□□□□ -0.23
GABPB1-201ENST00000220429 TFAP2DQ7Z6R9 452 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 LYSMD2Q8IV50 215 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 PSMA8Q8TAA3 256 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 C1orf74Q96LT6 269 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 LHPPQ9H008 270 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 KLK14Q9P0G3 267 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 WBP11Q9Y2W2 641 aaKnown RBP13.61□□□□□ -0.23
GABPB1-201ENST00000220429 NDUFA2O43678 99 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 SCO1O75880 301 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 SPNP16150 400 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 SDC4P31431 198 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 SLC1A6P48664 564 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 ALDH7A1P49419 539 aaKnown RBP13.61□□□□□ -0.23
GABPB1-201ENST00000220429 ETV1P50549 477 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 SLC12A1Q13621 1099 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 CA9Q16790 459 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 SLC36A3Q495N2 470 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 ESCO2Q56NI9 601 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 YIF1BQ5BJH7 314 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 MORN1Q5T089 497 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 TEDDM1Q5T9Z0 273 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 HMBOX1Q6NT76 420 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 ERAP2Q6P179 960 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 TLK2Q86UE8 772 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 UNC93AQ86WB7 457 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 PGAM4Q8N0Y7 254 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 PQLC3Q8N755 202 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 CLEC4CQ8WTT0 213 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 BCL7CQ8WUZ0 217 aaPredicted RBP13.61□□□□□ -0.23
GABPB1-201ENST00000220429 RNF39Q9H2S5 420 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 TCF7L2Q9NQB0 619 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 ABCB10Q9NRK6 738 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 WDR70Q9NW82 654 aa13.61□□□□□ -0.23
GABPB1-201ENST00000220429 UBQLN1Q9UMX0 589 aaKnown RBP13.61□□□□□ -0.23
GABPB1-201ENST00000220429 PIN4Q9Y237 131 aaKnown RBP13.61□□□□□ -0.23
GABPB1-201ENST00000220429 A0A0B4J203 849 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 SMIM28A0A1B0GU29 152 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 TYW5A2RUC4 315 aaKnown RBP13.6□□□□□ -0.23
GABPB1-201ENST00000220429 PLK4O00444 970 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 PIRO00625 290 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 DLGAP1O14490 977 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 TREHO43280 583 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 SH3BP5O60239 455 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 ZNF865P0CJ78 1059 aaPredicted RBP13.6□□□□□ -0.23
GABPB1-201ENST00000220429 ENO3P13929 434 aaPredicted RBP13.6□□□□□ -0.23
GABPB1-201ENST00000220429 TFE3P19532 575 aaPredicted RBP13.6□□□□□ -0.23
GABPB1-201ENST00000220429 YAP1P46937 504 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms