RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 PRAMEF1O95521 474 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 IL1BP01584 269 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 OCA2Q04671 838 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 PTPRCAPQ14761 206 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 RBM20Q5T481 1227 aaKnown RBP13.09□□□□□ -0.31
HDAC7-201ENST00000080059 PRMT9Q6P2P2 845 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 P3H2Q8IVL5 708 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 NPWQ8N729 165 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 NMD3Q96D46 503 aaKnown RBP13.09□□□□□ -0.31
HDAC7-201ENST00000080059 A0A0J9YYE9 177 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 MGEA5O60502 916 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 NTRK1P04629 796 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 CYP4F8P98187 520 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 RALGDSQ12967 914 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 MAPKAPK3Q16644 382 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 SLC9B1Q4ZJI4 515 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 ADGRF1Q5T601 910 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 LPCAT4Q643R3 524 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 SERPINA13PQ6UXR4 307 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 LRRTM3Q86VH5 581 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.09□□□□□ -0.312e-8■■■■□ 23.4
HDAC7-201ENST00000080059 FAM156AQ8NDB6 213 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 C3orf58Q8NDZ4 430 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 SUSD6Q92537 303 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 C19orf60Q96EN9 201 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 C8orf48Q96LL4 319 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 RTKNQ9BST9 563 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 HPS4Q9NQG7 708 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 TMLHEQ9NVH6 421 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 CDH22Q9UJ99 828 aa13.09□□□□□ -0.31
HDAC7-201ENST00000080059 ZNF487B1APH4 448 aa13.08□□□□□ -0.31
HDAC7-201ENST00000080059 TRIM38O00635 465 aa13.08□□□□□ -0.31
HDAC7-201ENST00000080059 DCLK1O15075 740 aa13.08□□□□□ -0.31
HDAC7-201ENST00000080059 SLC10A3P09131 477 aa13.08□□□□□ -0.31
HDAC7-201ENST00000080059 ALOX15P16050 662 aaPredicted RBP13.08□□□□□ -0.31
HDAC7-201ENST00000080059 SLC20A2Q08357 652 aa13.08□□□□□ -0.31
HDAC7-201ENST00000080059 ABRQ12979 859 aa13.08□□□□□ -0.31
HDAC7-201ENST00000080059 FAM98BQ52LJ0 330 aaKnown RBP13.08□□□□□ -0.31
HDAC7-201ENST00000080059 RNF19BQ6ZMZ0 732 aa13.08□□□□□ -0.31
HDAC7-201ENST00000080059 PHACTR4Q8IZ21 702 aa13.08□□□□□ -0.31
HDAC7-201ENST00000080059 TBC1D19Q8N5T2 526 aa13.08□□□□□ -0.31
HDAC7-201ENST00000080059 UBR7Q8N806 425 aa13.08□□□□□ -0.31
HDAC7-201ENST00000080059 DLG3Q92796 817 aa13.08□□□□□ -0.31
HDAC7-201ENST00000080059 CDKN2AIPNLQ96HQ2 116 aa13.08□□□□□ -0.31
HDAC7-201ENST00000080059 DNAJC28Q9NX36 388 aa13.08□□□□□ -0.31
HDAC7-201ENST00000080059 DEAF1O75398 565 aaPredicted RBP13.08□□□□□ -0.32
HDAC7-201ENST00000080059 SIX3O95343 332 aaPredicted RBP13.08□□□□□ -0.32
HDAC7-201ENST00000080059 ALDOAP04075 364 aaKnown RBP13.08□□□□□ -0.32
HDAC7-201ENST00000080059 C8AP07357 584 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 FAM58BPP0C7Q3 252 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 IL4RP24394 825 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 GPC1P35052 558 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 ALDH9A1P49189 494 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 MPPE1Q53F39 396 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 ACSBG2Q5FVE4 666 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 TRNP1Q6NT89 227 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 CAMK1DQ8IU85 385 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 FBXW8Q8N3Y1 598 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 FBXO30Q8TB52 745 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 BDH2Q9BUT1 245 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 ZCCHC2Q9C0B9 1178 aaKnown RBP13.08□□□□□ -0.32
HDAC7-201ENST00000080059 ZNF556Q9HAH1 456 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 COMMD8Q9NX08 183 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 PRPF19Q9UMS4 504 aaKnown RBP13.08□□□□□ -0.32
HDAC7-201ENST00000080059 F8W810 466 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 OTCP00480 354 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 HK2P52789 917 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 SIRPB2Q5JXA9 342 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 RD3Q7Z3Z2 195 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 FCRL3Q96P31 734 aaPredicted RBP13.08□□□□□ -0.32
HDAC7-201ENST00000080059 MIEF1Q9NQG6 463 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 INVSQ9Y283 1065 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 GLYATL1P3A0A0U1RQE8 302 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 IFRD1O00458 451 aaPredicted RBP13.08□□□□□ -0.32
HDAC7-201ENST00000080059 SLC9A3R1O14745 358 aaPredicted RBP13.08□□□□□ -0.32
HDAC7-201ENST00000080059 CLOCKO15516 846 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 TCEA2Q15560 299 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 ZBTB6Q15916 424 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 LRRC73Q5JTD7 316 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 PAQR3Q6TCH7 311 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 CCDC81Q6ZN84 652 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 SYT12Q8IV01 421 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 TWIST2Q8WVJ9 160 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 OTULINQ96BN8 352 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 OR52B2Q96RD2 323 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 CLCA2Q9UQC9 943 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 YIPF1Q9Y548 306 aa13.08□□□□□ -0.32
HDAC7-201ENST00000080059 C15orf38-AP3S2A0A0A6YYH1 394 aa13.07□□□□□ -0.32
HDAC7-201ENST00000080059 A0A1W2PRU2 124 aa13.07□□□□□ -0.32
HDAC7-201ENST00000080059 EME2A4GXA9 379 aaPredicted RBP13.07□□□□□ -0.32
HDAC7-201ENST00000080059 MAGEC1O60732 1142 aa13.07□□□□□ -0.32
HDAC7-201ENST00000080059 HAPLN1P10915 354 aaPredicted RBP13.07□□□□□ -0.32
HDAC7-201ENST00000080059 DDX5P17844 614 aaKnown RBP13.07□□□□□ -0.32
HDAC7-201ENST00000080059 ATP6V1C1P21283 382 aa13.07□□□□□ -0.32
HDAC7-201ENST00000080059 POLD2P49005 469 aa13.07□□□□□ -0.32
HDAC7-201ENST00000080059 CCT8P50990 548 aa13.07□□□□□ -0.32
HDAC7-201ENST00000080059 CLCQ05315 142 aa13.07□□□□□ -0.32
HDAC7-201ENST00000080059 C16orf87Q6PH81 154 aa13.07□□□□□ -0.32
HDAC7-201ENST00000080059 ARPINQ7Z6K5 226 aa13.07□□□□□ -0.32
HDAC7-201ENST00000080059 ITFG1Q8TB96 612 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms