RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 UBXN8O00124 270 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 KERAO60938 352 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 EFCAB14O75071 495 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 PRLP01236 227 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 PDHA1P08559 390 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 ENO3P13929 434 aaPredicted RBP8.24□□□□□ -1.09
VAMP3-201ENST00000054666 NAA20P61599 178 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 AP1S1P61966 158 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 TRAF2Q12933 501 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 RETSATQ6NUM9 610 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 NCEH1Q6PIU2 408 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 HPS6Q86YV9 775 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 DSELQ8IZU8 1212 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 STK40Q8N2I9 435 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 NKAPQ8N5F7 415 aaKnown RBP8.24□□□□□ -1.09
VAMP3-201ENST00000054666 ARL14EPQ8N8R7 260 aaPredicted RBP8.24□□□□□ -1.09
VAMP3-201ENST00000054666 MDGA1Q8NFP4 955 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 MRPS31Q92665 395 aaKnown RBP8.24□□□□□ -1.09
VAMP3-201ENST00000054666 TMA16Q96EY4 203 aaKnown RBP8.24□□□□□ -1.09
VAMP3-201ENST00000054666 MYO19Q96H55 970 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 GCNAQ96QF7 691 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 ZNF184Q99676 751 aaPredicted RBP8.24□□□□□ -1.09
VAMP3-201ENST00000054666 C2orf49Q9BVC5 232 aaPredicted RBP8.24□□□□□ -1.09
VAMP3-201ENST00000054666 S100A14Q9HCY8 104 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 FKBPLQ9UIM3 349 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 POMPQ9Y244 141 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 FNDC3AQ9Y2H6 1198 aaKnown RBP8.24□□□□□ -1.09
VAMP3-201ENST00000054666 LRCH1Q9Y2L9 728 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 TRAF6Q9Y4K3 522 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 CPQQ9Y646 472 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 COMMD10Q9Y6G5 202 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 COL4A6Q14031 1691 aa8.24□□□□□ -1.09
VAMP3-201ENST00000054666 LTBP2Q14767 1821 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 LCHNA4D1U4 455 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 E5RI56 91 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 SCAMP3O14828 347 aaKnown RBP8.23□□□□□ -1.09
VAMP3-201ENST00000054666 CRCPO75575 148 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 CKMP06732 381 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 CLTBP09497 229 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 PRSS56P0CW18 603 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 PKMP14618 531 aaKnown RBP8.23□□□□□ -1.09
VAMP3-201ENST00000054666 HDCP19113 662 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 MZF1P28698 734 aaPredicted RBP8.23□□□□□ -1.09
VAMP3-201ENST00000054666 CSKP41240 450 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 ABL2P42684 1182 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 MAPK8P45983 427 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 PTPRNQ16849 979 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 PFKFB4Q16877 469 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 MMEL1Q495T6 779 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 ARMC12Q5T9G4 340 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 RPS27LQ71UM5 84 aaKnown RBP8.23□□□□□ -1.09
VAMP3-201ENST00000054666 ADGRG6Q86SQ4 1221 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 DHDDSQ86SQ9 333 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 PELI3Q8N2H9 469 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 FBXO39Q8N4B4 442 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 MAB21L3Q8N8X9 362 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 AUTS2Q8WXX7 1259 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 WBP2Q969T9 261 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 KIAA1191Q96A73 305 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 ZNF689Q96CS4 500 aaPredicted RBP8.23□□□□□ -1.09
VAMP3-201ENST00000054666 C19orf60Q96EN9 201 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 ZFRQ96KR1 1074 aaKnown RBP8.23□□□□□ -1.09
VAMP3-201ENST00000054666 YME1L1Q96TA2 773 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 FEM1AQ9BSK4 669 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 MRPL1Q9BYD6 325 aaKnown RBP8.23□□□□□ -1.09
VAMP3-201ENST00000054666 GPR63Q9BZJ6 419 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 WDR41Q9HAD4 459 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 ZNF334Q9HCZ1 680 aaPredicted RBP8.23□□□□□ -1.09
VAMP3-201ENST00000054666 LHX3Q9UBR4 397 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 STK39Q9UEW8 545 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 VPS51Q9UID3 782 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 ZNF510Q9Y2H8 683 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 FCF1Q9Y324 198 aaKnown RBP8.23□□□□□ -1.09
VAMP3-201ENST00000054666 SH3BP1Q9Y3L3 701 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 MTF2Q9Y483 593 aaPredicted RBP8.23□□□□□ -1.09
VAMP3-201ENST00000054666 ASB3Q9Y575 518 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 SLC30A1Q9Y6M5 507 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 GIPC1O14908 333 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 LIN7AO14910 233 aaPredicted RBP8.23□□□□□ -1.09
VAMP3-201ENST00000054666 LRG1P02750 347 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 F11P03951 625 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 HSPA1AP0DMV8 641 aaKnown RBP8.23□□□□□ -1.09
VAMP3-201ENST00000054666 HSPA1BP0DMV9 641 aaKnown RBP8.23□□□□□ -1.09
VAMP3-201ENST00000054666 PSMA3P25788 255 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 GABRR2P28476 465 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 C1QTNF8P60827 252 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 DEFB103AP81534 67 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 STX5Q13190 355 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 FASTKQ14296 549 aaKnown RBP8.23□□□□□ -1.09
VAMP3-201ENST00000054666 OR4D1Q15615 310 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 UNC50Q53HI1 259 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 C1orf53Q5VUE5 145 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 CLEC6AQ6EIG7 209 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 UGT3A1Q6NUS8 523 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 PAQR3Q6TCH7 311 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 CLYBLQ8N0X4 340 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 ELMOD1Q8N336 334 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 HIPK4Q8NE63 616 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 DDI1Q8WTU0 396 aa8.23□□□□□ -1.09
VAMP3-201ENST00000054666 NRG4Q8WWG1 115 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms