RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Pkp3Q9QY23 797 aa30.38■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Cyp2g1Q9WV19 494 aa30.38■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Gm10715J3QP74 227 aa30.37■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 ChkaO54804 453 aa30.37■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Banf1O54962 89 aa30.37■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 SftpbP50405 377 aa30.37■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Lhx1P63006 406 aa30.37■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Cuzd1P70412 606 aa30.37■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Tubal3Q3UX10 446 aa30.37■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Sema3gQ4LFA9 780 aa30.37■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Tpp2Q64514 1262 aa30.37■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Ppfia2Q8BSS9 1257 aa30.37■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Spag16Q8K450 639 aa30.37■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Asb18Q8VHA6 467 aa30.37■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Vmn1r71Q8VIC0 307 aa30.37■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Tmem98Q91X86 226 aa30.37■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 NelfcdQ922L6 591 aa30.37■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Kat2bQ9JHD1 813 aa30.37■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Spry4Q9WTP2 300 aa30.37■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 AicdaQ9WVE0 198 aa30.37■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Anapc1P53995 1944 aaKnown RBP30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Zfp94E9Q6Y4 486 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Vmn1r86L7N213 316 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Bhlhe40O35185 411 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Usp4P35123 962 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Cdk18Q04899 451 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Mat2aQ3THS6 395 aaKnown RBP30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Kdm7aQ3UWM4 940 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 StyxQ60969 223 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Olfr1062Q7TR71 315 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Man2a2Q8BRK9 1152 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Olfr96Q8VFE3 313 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 EdaraddQ8VHX2 208 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Eif3hQ91WK2 352 aaKnown RBP30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Msi2Q920Q6 346 aaKnown RBP30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 KynuQ9CXF0 464 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Klhl41A2AUC9 606 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Mroh7A2AVR2 1279 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 JrklB2RRL2 523 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Srsf5O35326 269 aaKnown RBP30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Krt10P02535 570 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Tspyl3Q3UYP3 334 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 4930438A08RikQ5SPH3 536 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Olfr464Q5SW48 313 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Nomo1Q6GQT9 1214 aaKnown RBP30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Fnbp1lQ8K012 605 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Ly6g6eQ8K1T6 166 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Kctd5Q8VC57 234 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Tti1Q91V83 1085 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Pi16Q9ET66 489 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Cyp3a41aQ9JMA7 504 aa30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Hapln1Q9QUP5 356 aaKnown RBP30.36■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Rai1Q61818 1889 aa30.35■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 TrhrP21761 393 aa30.35■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Ephb2P54763 986 aa30.35■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 NfkbidQ2TB02 327 aa30.35■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 CtrcQ3SYP2 268 aa30.35■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Ptpn21Q62136 1176 aa30.35■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Itln1bQ80ZA0 313 aa30.35■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Rufy1Q8BIJ7 712 aa30.35■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Cmtr2Q8BWQ4 767 aa30.35■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Ttc22Q8C159 568 aa30.35■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Crispld1Q8CGD2 500 aa30.35■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 CherpQ8CGZ0 936 aaKnown RBP30.35■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Unc5aQ8K1S4 898 aa30.35■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Tmem82Q8R115 356 aa30.35■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 LiasQ99M04 373 aa30.35■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Rrp8Q9DB85 457 aaKnown RBP30.35■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Serpina3jD3Z451 420 aa30.34■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Zfp839E9PUU5 921 aa30.34■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Vmn2r85G3UW56 850 aa30.34■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Sec24cG3X972 1096 aaKnown RBP30.34■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Elk3P41971 409 aa30.34■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Acbd5Q5XG73 508 aa30.34■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Utp14bQ6EJB6 756 aaKnown RBP30.34■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Igsf3Q6ZQA6 1194 aa30.34■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Olfr309Q7TS01 308 aa30.34■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Acad10Q8K370 1069 aa30.34■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Tcf7l2Q924A0 459 aa30.34■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Znf654Q9DAU9 571 aa30.34■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Hao2Q9NYQ2 353 aa30.34■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 H2afb2S4R1M3 115 aa30.34■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Samd15F6XZJ7 620 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Dnmt3aO88508 908 aaKnown RBP30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Lim2P56563 173 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Caprin2Q05A80 1031 aaKnown RBP30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Nt5dc3Q3UHB1 546 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Dyrk2Q5U4C9 599 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Zdhhc20Q5Y5T1 380 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Rad54bQ6PFE3 886 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Stambpl1Q76N33 436 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Cstf2tQ8C7E9 632 aaKnown RBP30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Gprc6aQ8K4Z6 928 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Gfm2Q8R2Q4 779 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Olfr1208Q8VG47 308 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Adam24Q9R160 761 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Akap5D3YVF0 745 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Ebf2O08792 575 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Tspan6O70401 245 aa30.33■■■□□ 2.45
Ctdnep1-201ENSMUST00000108593 Acvr1P37172 509 aa30.33■■■□□ 2.45
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms