RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Sema4aQ62178 760 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Prr18Q6PAN7 307 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Olfr834Q7TRG8 312 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Osbpl6Q8BXR9 959 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 RtknQ8C6B2 564 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ints9Q8K114 658 aaKnown RBP9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 RabepkQ8VCH5 380 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Tcaf2Q921K8 919 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Commd8Q9CZG3 183 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Jph3Q9ET77 744 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Actn2Q9JI91 894 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Adam24Q9R160 761 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gbp2Q9Z0E6 589 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gria4Q9Z2W8 902 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Vmn2r118E9Q1C1 853 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 WapP01173 134 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Serpina3kP07759 418 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Chrm1P12657 460 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Fam107aQ78TU8 144 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 TifaQ793I8 184 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Elmo2Q8BHL5 732 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Lrrc19Q8BZT5 364 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Pex5lQ8C437 567 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Olfr1208Q8VG47 308 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Cttnbp2nlQ99LJ0 638 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Pi16Q9ET66 489 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Akr1c12Q9JLI0 323 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Col4a4Q9QZR9 1682 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Itpripl1A2ASA8 547 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Lonrf2B2RT44 518 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Vmn2r94E9PZK8 818 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Fbrsl1E9Q9T0 1031 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Vmn2r65G3X931 845 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Hcn2O88703 863 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Aldh3a1P47739 453 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Stmn4P63042 189 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Clec12aQ504P2 267 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 StyxQ60969 223 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Abcd2Q61285 741 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Spa17Q62252 149 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Zfp91Q62511 572 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Trim24Q64127 1051 aaKnown RBP9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Cgrrf1Q8BMJ7 332 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Pacs1Q8K212 961 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Vps39Q8R5L3 886 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Col26a1Q91VF6 440 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 GcshQ91WK5 170 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Pcdha5Q91Y15 934 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Cyp4f15Q99N18 534 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Nt5c3aQ9D020 331 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Dgcr8Q9EQM6 773 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Copg2Q9QXK3 871 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Dnajb9Q9QYI6 222 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Clec4aQ9QZ15 238 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gria3Q9Z2W9 888 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Oas1eA0A0J9YV76 386 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gm20828J3KMI7 228 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Kcnn4O89109 425 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 CblP22682 913 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Mkl2P59759 1080 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Mtf2Q02395 593 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Serpina6Q06770 397 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Hsf5Q5ND04 624 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Dyrk2Q5U4C9 599 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Cyp1b1Q64429 543 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Nmur2Q8BZ39 395 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Tmc7Q8C428 726 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Stard13Q923Q2 1113 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Det1Q9D0A0 550 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Slc12a4Q9JIS8 1085 aa9.92□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Cldn34b1B1AZQ8 209 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Adamts14E9PX39 1209 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 MlxO08609 298 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 P01670 111 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 P01671 111 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 P01672 111 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Pdx1P52946 284 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Fam107bQ3TGF2 131 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Cnga4Q3UW12 575 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Taok1Q5F2E8 1001 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 SnrpaQ62189 287 aaKnown RBP9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Fam126aQ6P9N1 521 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Prmt8Q6PAK3 394 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Dtd2Q8BHA3 168 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Sumf2Q8BPG6 308 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 PygbQ8CI94 843 aaKnown RBP9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Snx2Q9CWK8 519 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 L3hypdhQ9CXA2 354 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Cldn34b2Q9D9N2 209 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 MylkQ6PDN3 1941 aaKnown RBP9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 FscbA1EGX6 1074 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Itga9B8JK39 1036 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Cyp2j12G3UXT0 502 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gm21738J3QP72 227 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Sod3O09164 251 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Folh1O35409 752 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 RngttO55236 597 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Hcn4O70507 1186 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Dnmt3aO88508 908 aaKnown RBP9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 AldoaP05064 364 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 69.3 ms