RNA–Protein interactions for RNA: ENSMUST00000071898.5

Cpsf1-201, Transcript of Cleavage and polyadenylation specificity factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf1, Length 4,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1-201ENSMUST00000071898 Plxnb2B2RXS4 1842 aa9.91□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Vmn1r2A2AMT6 306 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Nipsnap3aB1AWZ3 247 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Gm3002E9PW72 216 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Zfp882E9Q4R4 555 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Ccdc149F6V035 524 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Zc3h12bG3X9I7 835 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 ClockO08785 855 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Olfm1O88998 485 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 SagP20443 403 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Epb41P48193 858 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Ampd1Q3V1D3 745 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Serpina3gQ5I2A0 440 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Flot2Q60634 428 aaKnown RBP9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 RbfaQ6P3B9 350 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Olfr213Q7TS32 327 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Dennd1cQ8CFK6 786 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 PolbQ8K409 335 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Gfm2Q8R2Q4 779 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Zfp617Q91WM0 559 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Pwp1Q99LL5 501 aaKnown RBP9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Ecrg4Q99LS0 148 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Gins4Q99LZ3 223 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Vmn1r65Q9EPS7 332 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Piwil1Q9JMB7 862 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 PollQ9QXE2 573 aaKnown RBP9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 SmgcF6VRN1 385 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Hk2O08528 917 aaKnown RBP9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Pole2O54956 527 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 HdcP23738 662 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Cyp3a16Q64481 504 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Cfap97Q6ZPR1 541 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Sgo2Q7TSY8 1164 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Mtmr12Q80TA6 747 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Zbtb33Q8BN78 671 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Nat14Q8BVG8 206 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Stx16Q8BVI5 326 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Samd3Q8C4H2 520 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 BicralQ8CHH5 1074 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 BsndQ8VIM4 307 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Lysmd3Q99LE3 305 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Lyrm1Q9CQB7 122 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Fam227aQ9D3V8 625 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Smpd3Q9JJY3 655 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Bace2Q9JL18 514 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Rfx5Q9JL61 658 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Stau1Q9Z108 487 aaKnown RBP9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Col4a5Q63ZW6 1691 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Cep290Q6A078 2472 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Tubb1A2AQ07 451 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 4930402K13RikB1AW18 415 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 PargO88622 969 aaKnown RBP9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Lsp1P19973 330 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Gjb3P28231 270 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 S100a9P31725 113 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Prim2P33610 505 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Alox12eP55249 662 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Nek10Q3UGM2 1111 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Fbxw11Q5SRY7 542 aaKnown RBP9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Smpd4Q6ZPR5 823 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 RragdQ7TT45 449 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Fzd10Q8BKG4 582 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Itfg1Q99KW9 610 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Pard3bQ9CSB4 1203 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Mfsd10Q9D2V8 456 aaKnown RBP9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Agpat3Q9D517 376 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 CntrlA2AL36 2334 aa9.9□□□□□ -0.82
Cpsf1-201ENSMUST00000071898 Gm13089A2AGW7 455 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Gm12394A2AKP6 982 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 DgkdE9PUQ8 1220 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Sipa1P46062 1037 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Usp46P62069 366 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Vps45P97390 570 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Mtf2Q02395 593 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 BtrcQ3ULA2 605 aaKnown RBP9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Srbd1Q497V5 1015 aaKnown RBP9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Lrrc8bQ5DU41 803 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Egfl8Q6GUQ1 293 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Suz12Q80U70 741 aaKnown RBP9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Pqlc1Q80XM9 271 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Slc17a6Q8BLE7 582 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Slfn5Q8CBA2 884 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Wdr37Q8CBE3 496 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Fnbp1lQ8K012 605 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Wnt9aQ8R5M2 365 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Slc22a19Q8VCA0 551 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Olfr449Q8VGW8 311 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Fig4Q91WF7 907 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Ptk2bQ9QVP9 1009 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Hs6st1Q9QYK5 411 aa9.9□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 SktA2AQ25 1946 aaKnown RBP9.89□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Gm45713A0A1B0GS68 446 aa9.89□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Klhdc7bA0A286YD60 1263 aa9.89□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Chrna4O70174 629 aa9.89□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Cd4P06332 457 aa9.89□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Surf2P09926 257 aaKnown RBP9.89□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Nfkb1P25799 971 aa9.89□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Serpina3cP29621 417 aa9.89□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Stmnd1Q6P3A1 279 aa9.89□□□□□ -0.83
Cpsf1-201ENSMUST00000071898 Rmnd5aQ80YQ8 391 aa9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms