RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Cdhr5Q8VHF2 831 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Sec14l2Q99J08 403 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Pbld2Q9CXN7 288 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Gm8257E9Q8R3 264 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Hipk1O88904 1210 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Sash1P59808 1230 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Gm1604bQ3TRG0 118 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Agbl2Q8CDK2 862 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Tmem161aQ8VCA6 480 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Efcab7Q8VDY4 628 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Yipf2Q99LP8 312 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Nipsnap3aB1AWZ3 247 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Cyp2d34L7N463 504 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Ercc2O08811 760 aaKnown RBP7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Scn2bQ56A07 215 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Lgals2Q9CQW5 130 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Vps35Q9EQH3 796 aaKnown RBP7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Dnajb1Q9QYJ3 340 aaKnown RBP7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Robo3Q9Z2I4 1366 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Gm8180E9PXN0 145 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Capn6O35646 641 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Tulp3O88413 460 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 NfycP70353 335 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Dlg4Q62108 724 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Kiaa0895Q7TQE7 519 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Tmem202Q80W35 275 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Luzp2Q8BGY3 345 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Trmt6Q8CE96 497 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Aldh4a1Q8CHT0 562 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Olfr697Q8VFM4 317 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Barhl2Q8VIB5 384 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 PdgfdQ925I7 370 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 TfgQ9Z1A1 397 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Gria4Q9Z2W8 902 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Mllt3A2AM29 569 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Klf6O08584 283 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Kcnu1O54982 1121 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Tdp1Q8BJ37 609 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Cntn6Q9JMB8 1028 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Rdh11Q9QYF1 316 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Gpc1Q9QZF2 557 aa7.26□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Gm8369E9PZI3 166 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Stxbp1O08599 594 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Mybpc3O70468 1270 aaKnown RBP7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Cbx2P30658 519 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Sec31bQ3TZ89 1158 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Znf513Q6PD29 541 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 1700001K19RikQ80ZT1 219 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Bmp3Q8BHE5 468 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Zfp120Q8BZW4 436 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Gfm2Q8R2Q4 779 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Vsig1Q9D2J4 407 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Q9D4A5 307 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Slc13a2Q9ES88 586 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 FarsbQ9WUA2 589 aaKnown RBP7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Dock2Q8C3J5 1828 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Rgsl1H3BL40 1073 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Lire1P11260 357 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Ctnnb1Q02248 781 aaKnown RBP7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Gm853Q3UNZ2 425 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Dnajc11Q5U458 559 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Fndc3bQ6NWW9 1207 aaKnown RBP7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Sema3dQ8BH34 777 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Elmo1Q8BPU7 727 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Smoc2Q8CD91 447 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Pcdhb13Q91Y06 796 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Ptdss1Q99LH2 473 aaKnown RBP7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Themis3Q9CU24 569 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Habp4Q9JKS5 411 aaKnown RBP7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Gm21488A0A087WR99 222 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Gm10324L7N208 604 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Il27raO70394 623 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Ap1g2O88512 791 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Psmd7P26516 321 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Glycam1Q02596 151 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 CamkmtQ3U2J5 323 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Tas2r109Q7M707 316 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Sdhaf3Q8BQU3 125 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Cxcl16Q8BSU2 246 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Eif3mQ99JX4 374 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Bpifa3Q9D9J8 232 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Nr4a3Q9QZB6 627 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Vmn2r11E9Q4X4 861 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 FaimlJ3QPY3 178 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Snx3O70492 162 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Cdc6O89033 562 aaKnown RBP7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Prdx3P20108 257 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 DctP29812 517 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Znrf3Q5SSZ7 913 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 GmppbQ8BTZ7 360 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Smad3Q8BUN5 425 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Ago3Q8CJF9 860 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Hao1Q9WU19 370 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Mbd1Q9Z2E2 636 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Tas2r122D3YU55 309 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Rhox13F6YCR7 232 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Gm11236J3QMS7 360 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Neurod4O09105 330 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Suv39h1O54864 412 aa7.25□□□□□ -1.25
Scn3a-201ENSMUST00000066432 Grpel2O88396 224 aa7.25□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 72.5 ms