RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Lrrc3P59034 257 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Icam5Q60625 917 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Q6P2K3 674 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Gpr150Q8BL07 427 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Hsdl1Q8BTX9 330 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Gucy1b2Q8BXH3 824 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Vps26bQ8C0E2 336 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Gbp5Q8CFB4 590 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Ptcd2Q8R3K3 381 aaKnown RBP16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Tex47Q9D5W8 253 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Q9D979 236 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Maged2Q9ER67 616 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Gsk3bQ9WV60 420 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 LctF8VPT3 1931 aa16.86■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Cyp4a29A0A087WPC3 509 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Gm45233A0A0N4SVE0 221 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 FgaE9PV24 789 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 CrymO54983 313 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Zfp39Q02525 718 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Dnajb14Q149L6 379 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Ankrd42Q3V096 527 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Magee2Q52KG3 523 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Ppp2r2bQ6ZWR4 443 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 C2cd4bQ80XU5 340 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Pcid2Q8BFV2 399 aaKnown RBP16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Ppp6cQ9CQR6 305 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Cntd1Q9D995 334 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 EtfbQ9DCW4 255 aaKnown RBP16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Gm4302E9PX25 294 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Chrna4O70174 629 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Gpat2Q14DK4 801 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 MthfsdQ3URQ7 372 aaKnown RBP16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Olfr325Q5NCD2 326 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Ndrg1Q62433 394 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Morc4Q8BMD7 928 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Sf3b4Q8QZY9 424 aaKnown RBP16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Clstn3Q99JH7 956 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Nck1Q99M51 377 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Doc2gQ9ESN1 387 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Sgo2bJ3QMK1 1167 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Cpa3P15089 417 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Isl1P61372 349 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Cdk18Q04899 451 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Ndst1Q3UHN9 882 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Psen2Q61144 448 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Ifi47Q61635 420 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Susd6Q8BGE4 302 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Tbc1d10bQ8BHL3 798 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Guca1bQ8VBV8 201 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Olfr570Q8VH12 312 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 VitQ8VHI5 650 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Bco2Q99NF1 532 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Tsga13Q9DA17 273 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Efcab9Q9DAM2 216 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Hacl1Q9QXE0 581 aa16.85■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Gm30302A0A1Y7VN40 1110 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 TpteG5E8H5 664 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Etv4P28322 485 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Hpcal1P62748 193 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Fmo5P97872 533 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Cyp2c65Q148B1 490 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Rmnd5aQ80YQ8 391 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Pyhin1Q8BV49 420 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Steap3Q8CI59 488 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Pcdhb17Q91VD8 799 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Slco1a5Q91YY5 670 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Rgs18Q99PG4 235 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Kif19Q99PT9 997 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Pih1d1Q9CQJ2 290 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Eif4e3Q9DBB5 207 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Armc8Q9DBR3 673 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Mad2l1Q9Z1B5 205 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Rhox2bA2A447 191 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Rhox2cA2AWL9 191 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 NmbrO54799 390 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Pfdn6Q03958 127 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Cnpy1Q4VAB4 94 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Xpo1Q6P5F9 1071 aaKnown RBP16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 EedQ921E6 441 aaKnown RBP16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Mrps18bQ99N84 254 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Ptges3lQ9D9A7 131 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 HephQ9Z0Z4 1157 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Ccdc120A2AEV7 629 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 PotegA5H0M4 473 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Rhox2hK7N6P1 191 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Aif1O70200 147 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 JunP05627 334 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Abcb1bP06795 1276 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Kpna2P52293 529 aaKnown RBP16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Cdo1P60334 200 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Gpr141Q7TQP0 305 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Pcdh20Q8BIZ0 952 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Ca12Q8CI85 354 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 BroxQ8K2Q7 411 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Far1Q922J9 515 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Micu3Q9CTY5 523 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Efcab1Q9D3N2 212 aa16.84■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Gbf1Q6DFZ1 1861 aa16.83■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Acnat1A2AKK5 416 aa16.83■□□□□ 0.29
Ctcf-201ENSMUST00000005841 Mup13L7N222 235 aa16.83■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms